| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5200 |
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| Symbol | |
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| ID | 8336554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5976360 |
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| End bp | 5977139 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644958298 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003115900 |
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| Protein GI | 256394336 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.993212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGA CTACGAAGCA GACCGAGAAC GCCGGACGCG TCCCGGCCGG CGCCTGGAGC
GGCAACCCGG TCGCCGTCAT CACCGGCGCC TCCCAGGGCC TGGGCCTGGC ACTGGCCCGC
GGCCTGGCCG AGCGCGGCTG GTCCCTGGTC ATCGACGCCC GGACCGCCGA CCGGCTGGCC
GCCGCGCACG CCGAGCTGGC GGCGCTCACC ACGGTCGTCG CGCTGTCCGG CGACGTCACC
GACGACGCCC ACCGCGCCGA CCTCGCCGAG GCGGCCTCCG AACTCGGCGG CGCCAGCCTG
CTGGTGAACA ACGCCTCCAG CCTCGGCGGC TCGCCGCTGC CGGCCCTCGC GCACTTCCCG
CTGGCGGCGC TGGAGCAGAC CTTCGCGGTG AACGTGGTGG CGCCGCTGGC GCTCACCCAG
CTGCTGCTGC CGCAGCTGCG CCAGCACGGC GGCGAGGTCG TCAACATCTC CTCCGACGCC
GCCGTCGAGC CCTACGAGGG CTGGGGCGGG TACGGCGCGT CCAAGGCCGC GCTGGACCAT
GCCACGGCGA TCTTCGGGCT GGAGGAGCCG CAGGTGCGGA TCTGGGCGGT GGATCCCGGC
GACCTGCAGA CGCAGATGCA CCAGGACGCC TTCCCCGGCG AGGACATCAG CGAGCTGCCG
CTGCCGGCGA CCGTGGTGCC GGCCTTTCTG CGGCTGATCG ACGAGCGGCG GCCGTCGGGG
CGGTATCAGG CCTCCGACCT GCTGCCCCGG TCCGCCGCGG CTGATGTGGA GGTGAGCTGA
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| Protein sequence | MNSTTKQTEN AGRVPAGAWS GNPVAVITGA SQGLGLALAR GLAERGWSLV IDARTADRLA
AAHAELAALT TVVALSGDVT DDAHRADLAE AASELGGASL LVNNASSLGG SPLPALAHFP
LAALEQTFAV NVVAPLALTQ LLLPQLRQHG GEVVNISSDA AVEPYEGWGG YGASKAALDH
ATAIFGLEEP QVRIWAVDPG DLQTQMHQDA FPGEDISELP LPATVVPAFL RLIDERRPSG
RYQASDLLPR SAAADVEVS
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