Gene Caci_5155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5155 
Symbol 
ID8336509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5920664 
End bp5921782 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content69% 
IMG OID644958253 
Productputative alanine-rich protein 
Protein accessionYP_003115855 
Protein GI256394291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.215555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0173621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG GGATCTATGT GTATCCGTGG GACGTCGTCG GGGATCCGGC GGCGGCTGAG 
CGGATCGCCG GGCTCGGCGT CGGACACGCG ACCGTCGCAG CGTTCTACCA TGCGACGCGC
GCGCTGACGC CGCGGCATCC GGCGCACCGG GTGATCGTCG CCGAGCGGAG CGCTGCGTAT
CTGCCGGTCG GTTCGGCGTG GTCGGGGCTG CTGCCGGAGG CTCAGGGCTG GGTTCCGGGG
CAGGACGTGT TCGGGGAGAC GGCGTCGGCG CTGGCGGGCG CGGGCGTGGC GACGCATGCG
TGGGTGGTGG TCGATCACGT CGACGGCTTT GACGGGCCGC ATGTGGTCAA CGCTTACGGC
GATGTGTATC CGTGGGCGCT GTGTCCGGCG AATGAATCAG TCCTCGAATA CGCGGTCGGA
TTGGCGGCGG TGGTCGCCGA GCGTCCGGAT ATCGCAGGGG TCGAATTCGA AGCCGCCGGA
TGGTACGGGT TCGACCACCT GAACCAGCAC GACAAGGTGG CCGGTATTCC GTTGTCCGAG
GACGAGCAGT TCCTGTTCTC GCTGTGCTTC TGTCCTGCGT GCTGCGCTGC CTATCGCGAG
GCTGGTGTGA ACGCCGCGCA GTTGCGTTCG GCGGTTCGTG CGCGGCTGGA TGCGACGTTC
GAGGGTCGTG TCGGTGCGGT GTTCGACGCG GACTTGGGCG ATGCGGTGGC TGCGATGCGC
GGTCGGGTCG CGGATCGGTT GCGGGAGGCG ATGGTGCGCG AGGTGCGTTC TCAGCGGTCT
GATCCGGGCT TCGCAGTGTC CTTCCATGCG ACTCCGCGAC CGCGTGTGAG CCTGGCCAAT
ACCGGGCTGG ACATGGCGAC GCTGCCGAGT GGGACCAGCG GCGTTGTGGT CAACTGCTGG
AAAGGGAGCG CGGAGCCGGT CGCAGCTTCG GTCGGGCACG GCGTGGATGT CTACGCCGGT
CTGCTCGGCA TTCGCGGCAT GGGCGGCGAT CCGGACGGAC TGGCGCGGGT CATCGGCGAT
GTTCGCGCGG CTGGGGCTGC CGGAGTTCGG ATCTACCACG CCGGGCTGGC CGGCGCCGAT
GACCTGACGG CGATCGGAAA GGCGCTGGCG GATGCCTGA
 
Protein sequence
MDAGIYVYPW DVVGDPAAAE RIAGLGVGHA TVAAFYHATR ALTPRHPAHR VIVAERSAAY 
LPVGSAWSGL LPEAQGWVPG QDVFGETASA LAGAGVATHA WVVVDHVDGF DGPHVVNAYG
DVYPWALCPA NESVLEYAVG LAAVVAERPD IAGVEFEAAG WYGFDHLNQH DKVAGIPLSE
DEQFLFSLCF CPACCAAYRE AGVNAAQLRS AVRARLDATF EGRVGAVFDA DLGDAVAAMR
GRVADRLREA MVREVRSQRS DPGFAVSFHA TPRPRVSLAN TGLDMATLPS GTSGVVVNCW
KGSAEPVAAS VGHGVDVYAG LLGIRGMGGD PDGLARVIGD VRAAGAAGVR IYHAGLAGAD
DLTAIGKALA DA