| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5039 |
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| Symbol | |
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| ID | 8336393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5776269 |
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| End bp | 5779250 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958138 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003115740 |
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| Protein GI | 256394176 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG GGGTGCTGGG ACCGGTGAGG GCCGGCGGCG GCCAAGAGGT CCCGGCGCTG
ACGCCGATGG TTCGGAGTCT GCTGGCCGTG TTGTTGGTGG AGGCCGGACG GCCGGTGTCC
GAAGCCCGGC TGACCGAGGC GTTGTGGGGC GGCAGTCCGC CGCAGACGTC GAAAGCCGCC
CTCCAGAACC ATGTGCTCGG CTTGCGGCGC GCGCTCGGTG TGGACGAAGC CGCGCGCGTC
CGCAGAACCT ACGACGGCTA CCTGATCGAG GTCGAGGCCG GCGAACTGGA CCTGCGGGAG
TTCGAGCAGC TCTCCGGCGA GGGATCCGAG GACCTCGTGG CGGGCCGATG GCAGGCGGCG
GCTGACGCCC TGACCGGGGC GTTGGCGCTC TGGCGCGGCG ATCCGCTCGC CGACGCGCTC
CCCGCGACGC GGGACGCGGT GGACGTCGGC CGGATCCACG AGGCCCGGCT TCAGACCGTC
GAGCAGCTGG CCCGGGCCCG ACTCGAACTC GGACACTACG ACCGGGTCAT CGGCGAGATC
GAGCCGCTGC TGCGGGAGCA TCCCTGGCGG GAGGCCATGC ACGGGCAGCT GATGCACGCG
CTGCACGGCG CCGGACGGCA AGCCGAAGCG CTCACCGTCT ACCAGCGGCT GCGCACCGGC
CTGGTCACCG AACTCGGCGT CGAGCCCTCG GCCGGGCTGG CGGACCTGCA CCGGCGGATC
CTGGCCGGCG ATCCCGCGCT GATCAGGACG ATCACGCCGG CCGGCGCTAC TCAGGGTCCC
AGTCGCGTCA TCGGCGCGCC TGACGCCGGT CAGTCCGGTC ACTCCCGTGA GTCCGGTGAG
TCCGACCACA CAGCCCACAC AGCCCAAGGC TCCGGCGCGG ATTCCGCCCA CGGCGCCGAC
CACCGCCGGC CGCAGAACCC TGATCCGCGC GCCGCCGACG CCGCCAACCC CGTCACCCCC
GCCAACGCCG TCATACCCCG CCAACTGCCG GCGAAGATCA GCCACTTCAC CGGACGCACC
GCCGCCCTGG CGGTGCTGGA GGAGTTCCTC GCGGCGGCGG GCGAGGGCGA CCAGCCGCTG
ATCGCGCTCG TCGGCACCGC CGGCGTGGGC AAGACGGCGC TGGCGGTGCA CTGGGCCCAC
CGGATCGCCT ACCGATACCC GGACGGCTGC CTTTATGTGA ACCTGCGCGG CTTCGACCCC
TCACAGGAGC CTGTGACCCC CGAGCAGGCG ATCCGCGGCT TCCTCCAAGC CCTCGGGCTG
CCCCGGCAGG AGCTGCCGGC CCTGTTCGCC GACCAGGTCG GCCGCTACCG CAGCCTCGCC
GCCGAGCGCC GGCTCCTGAT CGTGCTGGAC AACGCCCGCG ACGCCGAGCA GGTGCGCGAG
CTGCTGCCCG GCAATCCGGC GTGCCTGACG CTGGTCACCA GCCGCGACCG GCTCACCGGG
CTGGTCGCCG TCGACGGCGC CCGGCCGCTC CGGCTCGACA CGCTGCCCGC CGACGAGGCG
TTCGACCTGC TGGCCCGCCG GCTCGGCGGG CGGCACGCGG CCGAGGAGCC GGACGCGATC
CGGGAGATCG CAGAGCTCTG CGCGCGGCTC CCCCTCGCCC TGAACATCGC CGCCGCCCGG
ATCGCCACGA ACCCGCATCT GCCGATCGAG ATGTTCGTCC AGGAGCTGCG CGAGGCCGGC
GCCACACTGA GGACCCTGGA CGCCGGCGAC CGGGCGGCCA GCGTCCGGAC CGTCTTCTCC
TGGTCCTACC GGCAGCTCGG CGGGCCCGCG GCCCGGCTGT TCCGGCTGCT GGGCGTACAT
CCGGGCCCTG ATCTGGGCCT GTCGGTCTGC TCGGCGCTGA CGGCCCGGCC GCGCGCCGCG
ACGCTGGCCA CCCTGGAGGA GCTCACCGGC CTGCACCTGC TCGACCAGCA CGCGCCGGGC
CGGTACGTCC AACACGACCT GCTGCGGGTC TTCGCCGGCG AACTCGGGCA GGCGGTGGAC
GGCCGGGACG CCAGCCGCGA CGCCGAGCTG CTCACCCTCG ACCACTACCT GCACAGCGCC
TTCGCCGCCG AACGCCTGCT CCAGCCGGCC CGGCCGCCGA TCGCGCTCGC GCCGCCGCAC
GCCGGCTCCG CGCCCCTGGA CTTCGCCGAC CTGGCCGAGG CGCTGCGCTG GTACGACGCG
GAGTACCCGG TGCTGCTGGC CGCCGCGCGG CGGGCCGGCG CCGTCCCGGA CCCGCACGCC
TGGCAGCTGC CCTGGTCGAT GGTCACCTAC CTCGACCGGG CCGGGTTGTG GCACGACCTC
ACCGAGACGC TGACCGGGTC GCTGGCGGCA CTGCGGCGGA TCGGCGACAT CCCGAACCTC
GTCGCCGCCC ACATGTGCCT GGCACAGGTC CTGGGCCACA GGCTCAACGA GGCTGAGGCC
GCGGAGACCC ACTTCCAGGC GGCCCTGGAC CTCGACCGCG AGACCGACGA CGCCACCACC
GAGGTGAGGG TCATGGCGAA TCTCATGACC CTGCGAGGAA GGCAAGGACG CTGGGCGGAG
TCGGTGGTCT TCGGACTGCG GGCTCTGAAG CTCCTGCGCG AGAAGGGAGA GACCACTGTC
CTCCTGCCGA CCGTCCTCAA CAAGGTGGGC TGGAGCCACG TCCACCTCGG CCGGTACGAG
GAGGCGCTCG CCTGCTCCAC CGAAGCGCTC GAGTTGTTCC GGGAGACCGG ATTCCGCATC
GGCCAGGCCG ACGCCCTGGA CACCCTCGGC CTGGCCCGCC ACCGGCTCGG CGACACCGCC
GGCGCTGTGG CCTGCTACGA AGCGGCCGAG GCGGTCTTCA TCGAGGTCGG CGAACGGTTC
CTGCTCGCCG AGACGCTGAT GCGCCTCGGC GACGTCCACC TCACCGACCA CGCCGAGGCC
GCCGCCCGCG AGGTCTGGAC CCGGTCGCTG GCGATCCTCA GCGATATCGG CCATCCGACG
GCCGAGCAGG TCGAGGAGCG GCTCCGGTCC CTGGACCGCT GA
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| Protein sequence | MKFGVLGPVR AGGGQEVPAL TPMVRSLLAV LLVEAGRPVS EARLTEALWG GSPPQTSKAA
LQNHVLGLRR ALGVDEAARV RRTYDGYLIE VEAGELDLRE FEQLSGEGSE DLVAGRWQAA
ADALTGALAL WRGDPLADAL PATRDAVDVG RIHEARLQTV EQLARARLEL GHYDRVIGEI
EPLLREHPWR EAMHGQLMHA LHGAGRQAEA LTVYQRLRTG LVTELGVEPS AGLADLHRRI
LAGDPALIRT ITPAGATQGP SRVIGAPDAG QSGHSRESGE SDHTAHTAQG SGADSAHGAD
HRRPQNPDPR AADAANPVTP ANAVIPRQLP AKISHFTGRT AALAVLEEFL AAAGEGDQPL
IALVGTAGVG KTALAVHWAH RIAYRYPDGC LYVNLRGFDP SQEPVTPEQA IRGFLQALGL
PRQELPALFA DQVGRYRSLA AERRLLIVLD NARDAEQVRE LLPGNPACLT LVTSRDRLTG
LVAVDGARPL RLDTLPADEA FDLLARRLGG RHAAEEPDAI REIAELCARL PLALNIAAAR
IATNPHLPIE MFVQELREAG ATLRTLDAGD RAASVRTVFS WSYRQLGGPA ARLFRLLGVH
PGPDLGLSVC SALTARPRAA TLATLEELTG LHLLDQHAPG RYVQHDLLRV FAGELGQAVD
GRDASRDAEL LTLDHYLHSA FAAERLLQPA RPPIALAPPH AGSAPLDFAD LAEALRWYDA
EYPVLLAAAR RAGAVPDPHA WQLPWSMVTY LDRAGLWHDL TETLTGSLAA LRRIGDIPNL
VAAHMCLAQV LGHRLNEAEA AETHFQAALD LDRETDDATT EVRVMANLMT LRGRQGRWAE
SVVFGLRALK LLREKGETTV LLPTVLNKVG WSHVHLGRYE EALACSTEAL ELFRETGFRI
GQADALDTLG LARHRLGDTA GAVACYEAAE AVFIEVGERF LLAETLMRLG DVHLTDHAEA
AAREVWTRSL AILSDIGHPT AEQVEERLRS LDR
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