Gene Caci_4998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4998 
Symbol 
ID8336352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5721983 
End bp5722927 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content73% 
IMG OID644958097 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003115699 
Protein GI256394135 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.632176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAG TGCGTTTCCA CGAGTACGGC GACCCGACCG TCCTGCGGTA CGAGGACGTC 
GAGCAGCCCG TCCCCGGCGC GGGTCAGGTG CTGGTCCGGG TCGCGGCGAC ATCGTTCAAC
GGCGTCGACG GCACCATCCG AGCGGGCTTC ATGCGGGAGC CGATCCCCGT GGCGCTCCCG
CACACGCCGG GTATCGACGT GTCCGGCACG ATCGCCGCGC TGGGCGAGGG CGTGACCGGT
TTCGAGGTCG GGGACCATGT CGTCGGGTTC CTGCCGATGA CGGACGCCGG CGCGGCCGCG
CAGTACGTCC TCGCTCCGGC CGCGATCCTC GCACCGGCGC CGACCACCGT CCCGCTGGCC
GACGCCGCGG CGCTGCCCGC CGTGGGACTG ACCGCCTGGC AGGCGCTGTT CGACCACGCG
AAGCTCACCG CTGGCCGGCG CGTCCTGATC AACGGCGCGG GCGGAGCGGT CGGCGGCTAC
GCCGTGCAGC TCGCCAAGAA CGCCGGCGCG CACGTCGTCG CCACCGCCAG CCCGCGCAGC
GCCGACCGGG TCAAGGCAGC CGGCGCCGAC GAGGTCGTCG ACCACACCAC CTCCGCGGTC
ACCGAGGCGA CCGCGCCGGT CGATGTGATC CTGAACCTCG CACCGATCGA GCCGGCGCAG
CTGGCCGCGC TGCTCGGCTT GATCAACAAC GGCGGCGTCC TGGTCAACAC CACGGTCTGG
ATGCCCGCAC CCAGCGATGA AGAGCGCGGC GTGCGCGGCA TCGACCTGTT CGTCCGCAGC
GACGCCCAGC AGCTCTCGCA CCTCGTGGAC CTGATCGACC GCGGCGAGCT GCGCGTCGAG
GTCGCCCGCC GGGTGCCGCT GGCCGACCTG CAGACCGTGC ACGCCCAGGC TGCCGCAGGG
GAACTGCCCA GCGGCAAGGT CGTCATCGTC GCCCCTGAGG CGTGA
 
Protein sequence
MKAVRFHEYG DPTVLRYEDV EQPVPGAGQV LVRVAATSFN GVDGTIRAGF MREPIPVALP 
HTPGIDVSGT IAALGEGVTG FEVGDHVVGF LPMTDAGAAA QYVLAPAAIL APAPTTVPLA
DAAALPAVGL TAWQALFDHA KLTAGRRVLI NGAGGAVGGY AVQLAKNAGA HVVATASPRS
ADRVKAAGAD EVVDHTTSAV TEATAPVDVI LNLAPIEPAQ LAALLGLINN GGVLVNTTVW
MPAPSDEERG VRGIDLFVRS DAQQLSHLVD LIDRGELRVE VARRVPLADL QTVHAQAAAG
ELPSGKVVIV APEA