Gene Caci_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4987 
Symbol 
ID8336341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5705293 
End bp5705943 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID644958086 
Producthypothetical protein 
Protein accessionYP_003115688 
Protein GI256394124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0786156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0064224 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTCCGG CGTCGGCGAT CGCGGTGGTG GGTGCTGACG GCGGGCATCC GTTCAGCCAG 
AATCCGTGCT TTGAGCAGGA GGTGGCTTGG GCGGCGACTG CGAACACGCG TGCGCAGTAC
ATGGTGCTGG ACTCCCCGAT CGGCTTTACC TCGCCGCATG TATTGGAGTA CGCGTACCAC
GGGCCGGCTG GCGACTGCAC TGCTGCCGAA TATGCGTGCC AGTCGTTCAA CTGGGGTTAC
AACGCTGCGT ATTTCGCCGT GCAGAGTGCC TCGGCGGGGG GAGCGACCAG CGACAAGTGG
TGGCTGGATG TCGAGCTGCC GACGGCGACG AGCATCGACC CGCCTGGCGC GCAGTGCTAC
ACGCCGAACT TCTGGGTCTG TGACCAGACC ATGAACTCCA TCGTCGTCGC GGCCGCCGAA
CTCGCGCTGC GGGAGCAGGG CAAGGATGTG GGCGTCTACT CCACGCAGAA GCAGTGGGGC
GCCATCACCG GCGGGCTGCC TTTGGGCGGA CCGATCTGGA TCGCCGGCTA TGACTACCCG
GCGTCGACAT ACTGCGACGC GGCGAACGCT CGCCAGTACT GGTTCGCTGC GGGCAGGCCC
GCCATGGTCC AGAGCCTGCC GGCGACCTTC GACCCGGACA CCGCCTGCTG A
 
Protein sequence
MPPASAIAVV GADGGHPFSQ NPCFEQEVAW AATANTRAQY MVLDSPIGFT SPHVLEYAYH 
GPAGDCTAAE YACQSFNWGY NAAYFAVQSA SAGGATSDKW WLDVELPTAT SIDPPGAQCY
TPNFWVCDQT MNSIVVAAAE LALREQGKDV GVYSTQKQWG AITGGLPLGG PIWIAGYDYP
ASTYCDAANA RQYWFAAGRP AMVQSLPATF DPDTAC