Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4987 |
Symbol | |
ID | 8336341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5705293 |
End bp | 5705943 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644958086 |
Product | hypothetical protein |
Protein accession | YP_003115688 |
Protein GI | 256394124 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0786156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0064224 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTCCGG CGTCGGCGAT CGCGGTGGTG GGTGCTGACG GCGGGCATCC GTTCAGCCAG AATCCGTGCT TTGAGCAGGA GGTGGCTTGG GCGGCGACTG CGAACACGCG TGCGCAGTAC ATGGTGCTGG ACTCCCCGAT CGGCTTTACC TCGCCGCATG TATTGGAGTA CGCGTACCAC GGGCCGGCTG GCGACTGCAC TGCTGCCGAA TATGCGTGCC AGTCGTTCAA CTGGGGTTAC AACGCTGCGT ATTTCGCCGT GCAGAGTGCC TCGGCGGGGG GAGCGACCAG CGACAAGTGG TGGCTGGATG TCGAGCTGCC GACGGCGACG AGCATCGACC CGCCTGGCGC GCAGTGCTAC ACGCCGAACT TCTGGGTCTG TGACCAGACC ATGAACTCCA TCGTCGTCGC GGCCGCCGAA CTCGCGCTGC GGGAGCAGGG CAAGGATGTG GGCGTCTACT CCACGCAGAA GCAGTGGGGC GCCATCACCG GCGGGCTGCC TTTGGGCGGA CCGATCTGGA TCGCCGGCTA TGACTACCCG GCGTCGACAT ACTGCGACGC GGCGAACGCT CGCCAGTACT GGTTCGCTGC GGGCAGGCCC GCCATGGTCC AGAGCCTGCC GGCGACCTTC GACCCGGACA CCGCCTGCTG A
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Protein sequence | MPPASAIAVV GADGGHPFSQ NPCFEQEVAW AATANTRAQY MVLDSPIGFT SPHVLEYAYH GPAGDCTAAE YACQSFNWGY NAAYFAVQSA SAGGATSDKW WLDVELPTAT SIDPPGAQCY TPNFWVCDQT MNSIVVAAAE LALREQGKDV GVYSTQKQWG AITGGLPLGG PIWIAGYDYP ASTYCDAANA RQYWFAAGRP AMVQSLPATF DPDTAC
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