| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4980 |
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| Symbol | |
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| ID | 8336334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5695874 |
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| End bp | 5698267 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644958079 |
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| Product | polysaccharide lyase 8 alpha-helical |
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| Protein accession | YP_003115681 |
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| Protein GI | 256394117 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00611188 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0115553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTG AAGACTTCCC GCGCGGGCTG TCCCGCCGCT CGGCCATGCT GGCCGGTGCC
GCGCTGGGTC CGGCGTTGTT CCTCGGCACA TCCGCGGCCG CGCCCCAGCG CGCCGAGGCG
GCCACGTCCT CGGACTTCGC GAAGGTCCGC AGCCAGTGGC ACGACACCCT GATCGGCGAC
GTCAGCACCT CCGACCCGGT GCTGACCGCC TACGCGCAGG CGATGGCCGG CGTCGCGAAC
GGGCTGTGGT CGGCGCTGGA CACCTCCGCC TCCCGCACCT ACCTGTGGGC GGATCTGGAC
AGCAGTACCG TCTCGGCGGT CCAGCGTGAC GTGGCCGGAC GGTTGCGCCA GCTGGCCTTG
GCCTACGCCA CGCCGGGATC GACGCTGTCG GGCAACGCCG CACTGCTGGC CGACATCCGC
TCCGCCCTGG ACTGGTTCCT GGCCCACAAG TACGGCGTCA CCGCGATGTA CGACAACTGG
TGGGACTTCC AGATCGGCAT CCCGTTGGCC GTGAACGACA TCTGCGTGGC GCTGTACGAC
CAGCTGTCGG CCGCCCAGAT CTCCACCGCG ATGGCCGCGA TCGTCCGCTA CGCGCCGGAC
CCGACCGTGG TGGGCGGCGC GACGGCCACC GGCGCCAACC TCAACTGGAC CTGCTCGATC
GCGACCGTGC GCGGGGCCCT GAGCCAGGAC GCGAACGTCA TCGACACCGC CATGGCGGCG
ATCGGGAACC TGTACCCGTA CAGCACCAGC GGCGACGGGT TCTATCCCGA CGGCGGGTTC
ATCCAGCACA AGGTCTACGC CTACAGCGGC TCCTACGGAG TGTCGCTGCT GCAATACCTG
ACCTACCTGC TGGTCGCGGT GCAGGGCACT CCGTGGGCGG CGACATCGGA CCAGGTGCAG
CGGGTCTACA CCTGGACGCA AGAGAACTAC CGGCCGTGGA TGTACTGCGG GGCGTTCATG
GACATGGTGC GCGGGCGCGC GCTGTCCCGC TTCTACGAGA ACGGTGTCCG CATCGGGCGG
CTCACGACCG CGACCGTGCT GCAGTTGGCG CGCGTCTTCC CGGCCAGTGA GGCGCTGACG
CTGCGCTCGC AGGCCAAGGG CTGGATCGCC GCGGACACCT ATCTGGATTT CTTCACCTAC
GATCCGGCGC CGCTGGAGCA GGTGCGGATC TCTTCCATAG CGCTGGGCCG GGCGGTCGTG
GCCGACAGCG CCATCCCGAC CGCCGCGGAA TCCACGACGT CGGTCGTGGC GACCTCGATG
GCGCGGATCG TGCACCGGCG CCCCACGTTC GCGCTCGGTA TCGCGATGGA CGACACGCGC
ATCAAGCCGT ATGAGTCGGC CAACAACGAG AACCTCGAAG GCTGGTACAC CGGCGAGGGC
GCGACCTACA TGTATCTGCC CGACCACGTC GGACACTGGG CCAACGAGTA CTGGCCGACC
GCGAACAAGT ACCGGATCCC CGGCGTGACG CTGGACACCA AGACCCTTGC CCTGGGGACC
GGCCGCGGCT CGACGAACAC CTGGGCCGGC GGCGCAGTGC TGGACGGGAA CGTGGCCGCC
GGGATGGGAC TGTCCTTCGC CGTGCAGACG CTGACCGGCC GCAAGTCATG GTTCTGCGTC
GACGACGCGG TGATCTGTCT GGGCGCGGGC ATCGCCTCCA GCGACGGCCA CACCATCGAG
TCGATCATCG AGAACCGGAA CATCGGCCCG AACGGACAGT CCAACGTCCA CGTCGACGGC
GCGGTCGTGC TAGCCACCCC GAGCAGCACG CCGATCGTCG TCCAGCCGAG CTGGATCTAC
CTGGACAACG CCGGCGGGTA CGTCTTCTCC TCCGGCGGCC ATGTCACGCT GGTGCGCGAG
GACCGCACCG GAAAGTGGAC CGACATGGAC CACCGCGGCG TCTACGAAGA CACCACGGCC
TACACGCGCC GGTTCGTCAC CATGTGGGTC GACCACGGCG TGAACCCGAC CGCCGGCGGC
TACCACTACG TCTTGCTGCC CGGCGCCAGC TCCGCGCAGA CCTCTGCTTT CGCCGCCTCC
AACGACATCA CCGTCGCGGC CAACACCCCT CAGGTGCAGG CAGTGAGCCG CTCCGGCTCG
GGATTCGCGA TGGCCAACGT CTGGCAGGCC GGTGCTCCGA AGGCTGCCGG GATCCAGGTC
GACAAGACCG CCTCGGTCGT CACGCACCGG ACGCCGGGCG TGTTGTCGGT GGCCGTCAGC
GATCCGACGC AGGCGCTCAC CGGCTCGGTG ACGGTCACCA TCGACGGGCC CGTGACAGGC
ACCATCTCCG CGGCGCCGGA GATCACGGTG CTGGCCACCA CGCCGAACCT GCGGCTGTCG
GTAGCGGTCG CGTCAGGTGC GGGTCAGACT TTCGTCGCTC GGTTCGCCGT CTGA
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| Protein sequence | MSVEDFPRGL SRRSAMLAGA ALGPALFLGT SAAAPQRAEA ATSSDFAKVR SQWHDTLIGD
VSTSDPVLTA YAQAMAGVAN GLWSALDTSA SRTYLWADLD SSTVSAVQRD VAGRLRQLAL
AYATPGSTLS GNAALLADIR SALDWFLAHK YGVTAMYDNW WDFQIGIPLA VNDICVALYD
QLSAAQISTA MAAIVRYAPD PTVVGGATAT GANLNWTCSI ATVRGALSQD ANVIDTAMAA
IGNLYPYSTS GDGFYPDGGF IQHKVYAYSG SYGVSLLQYL TYLLVAVQGT PWAATSDQVQ
RVYTWTQENY RPWMYCGAFM DMVRGRALSR FYENGVRIGR LTTATVLQLA RVFPASEALT
LRSQAKGWIA ADTYLDFFTY DPAPLEQVRI SSIALGRAVV ADSAIPTAAE STTSVVATSM
ARIVHRRPTF ALGIAMDDTR IKPYESANNE NLEGWYTGEG ATYMYLPDHV GHWANEYWPT
ANKYRIPGVT LDTKTLALGT GRGSTNTWAG GAVLDGNVAA GMGLSFAVQT LTGRKSWFCV
DDAVICLGAG IASSDGHTIE SIIENRNIGP NGQSNVHVDG AVVLATPSST PIVVQPSWIY
LDNAGGYVFS SGGHVTLVRE DRTGKWTDMD HRGVYEDTTA YTRRFVTMWV DHGVNPTAGG
YHYVLLPGAS SAQTSAFAAS NDITVAANTP QVQAVSRSGS GFAMANVWQA GAPKAAGIQV
DKTASVVTHR TPGVLSVAVS DPTQALTGSV TVTIDGPVTG TISAAPEITV LATTPNLRLS
VAVASGAGQT FVARFAV
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