Gene Caci_4967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4967 
Symbol 
ID8336321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5677829 
End bp5680459 
Gene Length2631 bp 
Protein Length876 aa 
Translation table11 
GC content70% 
IMG OID644958066 
Producthypothetical protein 
Protein accessionYP_003115668 
Protein GI256394104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.41505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.327151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACAG CCATACGCCG ACGACTGCTC CCGATCGGAG CGGCTTGTGC GGCCCTGACA 
GTGGCCTTGG CCGGCCCGCA GGCGTCCGCC GCGAACACTC TGAACGCCAG CGGTACGCAT
CCCCACAATC GGCCGCACGC GATCAGCACG TCCACCGCTT CTACGGGTGG CATTCGATCT
GACGCGGTCA GCGGTCCGCC CGGCGACCCC GACGGCGGGG TCGACGACCC GAGCGCCGCG
GACAACGAGT ACTTCGCCGC GCGCAGTGCG CCCGGTGTCG TGGCGCCCGG CGCCTACGGC
GCCGCCTGGC AGCAGATGCA GTCCCTGCCG CACTCCGGTC CGGAGTGGAA GCCGGTCACC
ACCACGGCGT ACAACGCCGA CGACCCGCGC TACCGCGACT ACGACTCGAA CTCCTCCGGC
GGTGCCGGCG ACGTCACCGG CCGGATCACC GGCATGGCCG CCGACAACGC CGGCCACGTC
TATGCCGGCG GCGCCAACGG CGGTGTGTGG CGGTCCTCCA CCGGCGGCGG GAAGTGGACG
CCGATCTCCG AGTCGCTCCC GGCGGCCTCG ACCGGCGACC TGGAACTGGA CTCCTCAGGC
CGGCTCTGGT ACGCCACCGG CGAGGCGAAC ACAGCCTCGG ACACGTTCAC CGGCTCGGGC
GTGTACGTGC TCTCCCACCC GCAGAACGGG ACGTTCTCCA CCCGCGACCG CGTCGGCGGC
ACGGAGCTGC AGTCCACCAG CATCCGCAAG ATCCGCTTCA TCGGGAACAC GGTCTACGCG
GCCACGACCC GCGGTCTGTG GTCGCACTCG CTGAGCGACC TGCGCGGCGC GTGGAAGCTG
GAGTTCGCGC CGAACCCCAC CTACCTGCCC GGCGCCTCTC AGGCCGCTGA CCCGGCCGCG
CCGTACAAGA ACATCGTCAA CGACATCACC GCCGATCCGA AGAACCCCGG CAAGCTGATC
GCGGCGATCG GCTGGCGCAG CGGTGATGCC TACAACGGCT TCTACACCAA GTCCGGCGGT
ACCTGGACGC GCATCACCAC CTCGCTCGGC GACCTGCCGA CCGCCGCGGC CAACGTCGGC
GCCGTGACCT TCGCCGGGTC GAAGGACGGC TCGAAGTTCT ACGCGATCAA CCAGGACCCG
ACGAAGATCA CCAGCCCGAA GTCCACGCTC GGCGGCGTCT ACGTCTCCGA CGGCACGCCG
TTCGGTCCGT GGAAGCTGGT CGCGGACTCC CCGAAGCTGG AGGCCTCCGG CTCCGCCGAG
ACCGGCGCCA CCTACAACCC CGGCGTCCAG GCCTGGTACA ACCAGTTCCT GCAGGTCGAT
CCGGCCGACC CGAACCACGT CTACATGGGT CTGGAAGAGG TCTACGAGTC CCACGACGCC
GGCACGACCT GGAACACGGT CGGCCCGTAC TGGAACTTCA CCTACCCCTG CTGGTCGATC
GACCCGACCG AGCAGACCGG CACGTGCAGC CCCACGACCC ACTCCGACCA GCACGCGGTC
GCGATCGGCG GCATCGGCGG CAAGAGCTAC GTCGTGGTCG GCAACGACGG CGGCGTGTAC
AAGCGGCCGG TGGCCGGCGT GCTGGACTCC GGCGGCCACG CCGCGGACTG GCAGTCGCTC
AACGACGGAA GCATCGACAC CCTGCAGTAC TACTCGGTGG GCGTCGGCGC CGACCCGTCC
GGCCACGGCG TCGCCGTCTC CGGCGGTCTG CAGGACAACG GCCAGTCGAT CCTGCGCAGC
GGCGACAAAG TGATGGGCTC CAACTTCGGC GGCGACGGCG GGGACACGCT GGTCGACCCG
AAGAACGGCT GCAACATCGC CGAGGAGTAC ACCAACCTGT CGATCTGGGT CACCAACGAC
TGCGGCCAGA ACGTCAGCAT CGATTACTCG ACGAGCACCG AGTACAACGT CCCGCCGAAC
GACGGAGTGA ACGGCACCGC CCGCTTCACC GCCCCGTTCA CCACCGACTC CCAGAGCCCG
AACACCTGGG TGGCCGGCGG CCAGCACGTC GCCGTCCAGA CCAAGGGCTT CGCCATCCGC
GCCACCTCCG ACTGGACCGA CGTCTACGAC CTCGGCGCCG GCAACCTGGC CACGGCCGTC
GCGGACTCCG GCGGCAAGAT CTACGCGGCC TGGTGCGGCG GCGGCTGCAA CAGCGTCGGC
TTCACCCGCG GCATCGCGGT CGGCAACGCC GACGGCACCG GCTGGCACCA GCTGACCCTG
CCGACCGACG GCACCTCGCT GCCCAACCGC TACCTGTCCT CCCTCGCGAT CGACCCGAAG
GACGCCAACC ACGTCTACGT CGGCGTCAGC GGCTTCTCCC GGGCCTGGAC CGAGGGTCCC
GGCGCGGGAA TCGGGCACCT CTACGAGAGC CACGACGGCG GCGCGACCTG GAAGGACATC
TCGGCGAACC TGCCGGACGT CCCGGCGGAC TCCATCGTCC TGCTCCCGCA CGGCGGCATC
GCGCTGGCCA CCGACCTCGG CGTGTTCTAC CAGGGCCCGC ACAACTCGCG CTGGAGCATC
CTGGGCGACG GCCTGCCGAC CAACGCCACG CTGCAACTGT CGCTGGGCCC GGACGGGAAC
CTGTACGCGG CCACGCACGG ACGCGGCATC TGGAAGATCC GGGTGCAGTA G
 
Protein sequence
MRTAIRRRLL PIGAACAALT VALAGPQASA ANTLNASGTH PHNRPHAIST STASTGGIRS 
DAVSGPPGDP DGGVDDPSAA DNEYFAARSA PGVVAPGAYG AAWQQMQSLP HSGPEWKPVT
TTAYNADDPR YRDYDSNSSG GAGDVTGRIT GMAADNAGHV YAGGANGGVW RSSTGGGKWT
PISESLPAAS TGDLELDSSG RLWYATGEAN TASDTFTGSG VYVLSHPQNG TFSTRDRVGG
TELQSTSIRK IRFIGNTVYA ATTRGLWSHS LSDLRGAWKL EFAPNPTYLP GASQAADPAA
PYKNIVNDIT ADPKNPGKLI AAIGWRSGDA YNGFYTKSGG TWTRITTSLG DLPTAAANVG
AVTFAGSKDG SKFYAINQDP TKITSPKSTL GGVYVSDGTP FGPWKLVADS PKLEASGSAE
TGATYNPGVQ AWYNQFLQVD PADPNHVYMG LEEVYESHDA GTTWNTVGPY WNFTYPCWSI
DPTEQTGTCS PTTHSDQHAV AIGGIGGKSY VVVGNDGGVY KRPVAGVLDS GGHAADWQSL
NDGSIDTLQY YSVGVGADPS GHGVAVSGGL QDNGQSILRS GDKVMGSNFG GDGGDTLVDP
KNGCNIAEEY TNLSIWVTND CGQNVSIDYS TSTEYNVPPN DGVNGTARFT APFTTDSQSP
NTWVAGGQHV AVQTKGFAIR ATSDWTDVYD LGAGNLATAV ADSGGKIYAA WCGGGCNSVG
FTRGIAVGNA DGTGWHQLTL PTDGTSLPNR YLSSLAIDPK DANHVYVGVS GFSRAWTEGP
GAGIGHLYES HDGGATWKDI SANLPDVPAD SIVLLPHGGI ALATDLGVFY QGPHNSRWSI
LGDGLPTNAT LQLSLGPDGN LYAATHGRGI WKIRVQ