| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4858 |
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| Symbol | |
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| ID | 8336212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5525289 |
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| End bp | 5527082 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957958 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_003115560 |
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| Protein GI | 256393996 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGGT CCAAGGCGCT CGAGGCGGAA CCCCGGTTCC GTCCTCGAGT GCTGCGCGAC
TACGCGCTGC TGGCCGACGG CGAGCGCGGG GCGCTGATCG GTCCGGAAGG GGACATCGCC
TGGATGTGCG CGCCCCGATG GCACAGCGAC GCGGTCTTCT CCACCTTGAT CGGCGGCGCG
GGCACGTACG CCGTCACGCC GAGCGATCCG CGCTATGTCT GGGGCGGTGC GTACGAGCCG
GGCACGCTGA TCTGGCGCAG CCGCTGGGTG AGCGGCGACG CGCTGATCAA GTGCCGCGAG
GCGCTGGCCT TCCCCGGCGA CCCCGCCCGC GCGGTGCTGC TGCGGCGGGT GTGTGCCCGG
AAGGGGGCGT GCCGGGTCTC CGTGCTCTTG GAGCCGCGCG CCGCCTTCGG GCACTACGCC
GGCACCAACC ACCTGAGCCG GCACGACGGG GTGTGGACGG CGCACAGCGG ACCGCTGCAC
TGGCGCTGGA CCGGAGGTTG GGACGCCCAT ACCGAAGGGC ACACCCGCCT GTCCGGCGCG
ATCCTCTCGC TGGACCTGGA CATCGCCGAA GGCGGCTTCC ACGACCTGGT CCTGGAGCTC
TCCGACGCCC CGCTCCCCCG CGAGTCACCC GATCCCGAAG CGCTGTGGCA GACCACTGAG
TTGGCGTGGA AACGCAGCGG ATCAGACACC TCCGACACCA TCGCCCCGCG CGAGGCCGAC
CATGCCCAGG CGGTGCTGCG CGGCCTGACC AGCGGCACCG GAGCCATGGT CGCGGCGGCG
ACCATGGCCC TGCCCGAGCA AGAGGAATCC CCGCGCAGCT ACGACTACCG CTACGCCTGG
ATCCGCGACC AGTGCTACGC CGGCATCGCC GCCGCGGCCG TCGGCGCCAC CGATCTGCTG
GACCGCGCGG TGGCGTTCAT CACCGACCGG CTGCTCCAGG ACGGTCCCCG GCTGCGCGCC
GCCTACACCG TCACCGGCGC CCCGGTCCCC GACGAGTACG TGTTGGATCT GCCCGGCTAC
CCCGGCGGCA CCGACCGGGT CGGCAACTGG GTCAACCAGC AGTTCCAGCT CGACGTGTTC
GGCGAGGTGA TGCAGCTGCT GGCCACCGCC GCCGGCCTGG ACCGGCTGGA CCGCGACGCC
GCCAACGCCC TGCGCGTGGC CGTCGACATC GTCGGGAAGC ACTGGGACGA GCCGGAGGCA
GGCATCTGGG AACTGCACGA CCGGCGCTGG ACCCACTCCC GCCTGTCGTG CCTGGCCGGA
TTGCGGCGGG CGGCCGCGCT GCCCGGCGCC GGACGAGACC TGCCGCACGC CGCCGCCCTG
GCCGATGCCA TCCTCGCCCG GACCTCGCAG ACCTGCACTC ATCCCGACGG CTACTGGCAA
CGCGCCCCGG ACGATCCGCG TCCCGACGCC TCGCTGCTGC TGCCACCGGT CCGGGGAGCG
TTACCCGCCG ACGACCCGCG TACCGTCGCC ACGCTGGCAG CCGTTCGCGC GCAGCTGACG
GACGAGGGAT ACGTCTACCG CTACCACCAC GGCGGGCATC CCTTGGGCGA TACCGAAGGC
GCGTTCCTGC TGTGCGGCTT CACCATGGCG CTGGCAGAAC ATCAGCAGGG CAATGAAGTA
CGCGCGATGC ATTACTTCGA AAGAACCCGA AGCGCATGCG GGCCCGCGGG CCTGTTCTCC
GAGGAATACG ACCCCGCACA ACGACAATTG CGCGGCAACC TGCCCCAGGC TTTCGTCCAC
GCCGTGTTTT TGGAATGCGC GGCGAGCCTC GGACACCAGC CGTCTATCCG ATGA
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| Protein sequence | MVRSKALEAE PRFRPRVLRD YALLADGERG ALIGPEGDIA WMCAPRWHSD AVFSTLIGGA
GTYAVTPSDP RYVWGGAYEP GTLIWRSRWV SGDALIKCRE ALAFPGDPAR AVLLRRVCAR
KGACRVSVLL EPRAAFGHYA GTNHLSRHDG VWTAHSGPLH WRWTGGWDAH TEGHTRLSGA
ILSLDLDIAE GGFHDLVLEL SDAPLPRESP DPEALWQTTE LAWKRSGSDT SDTIAPREAD
HAQAVLRGLT SGTGAMVAAA TMALPEQEES PRSYDYRYAW IRDQCYAGIA AAAVGATDLL
DRAVAFITDR LLQDGPRLRA AYTVTGAPVP DEYVLDLPGY PGGTDRVGNW VNQQFQLDVF
GEVMQLLATA AGLDRLDRDA ANALRVAVDI VGKHWDEPEA GIWELHDRRW THSRLSCLAG
LRRAAALPGA GRDLPHAAAL ADAILARTSQ TCTHPDGYWQ RAPDDPRPDA SLLLPPVRGA
LPADDPRTVA TLAAVRAQLT DEGYVYRYHH GGHPLGDTEG AFLLCGFTMA LAEHQQGNEV
RAMHYFERTR SACGPAGLFS EEYDPAQRQL RGNLPQAFVH AVFLECAASL GHQPSIR
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