Gene Caci_4813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4813 
Symbol 
ID8336167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5486188 
End bp5486526 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content67% 
IMG OID644957913 
Productnitrogen regulatory protein P-II 
Protein accessionYP_003115515 
Protein GI256393951 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.311514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA TCACCGCGGT CATCAAGCCG TTCAAGCTCG ACGAGGTGAA GAACGCCCTG 
CGCAGCTTCG GCGTCCACGG CATCACGATC ACCGAGGTCA GCGGCTCCGG CCGGCAGCGC
GGCCACACCG AGGTCTACCG CGGCGCGGAG TACACCGTCG ACCTGGTCCC GAAGGTCCGC
ATCGAGGTGC TGTGCGAGGA CGAGGACACC GACGACTTGG TGAACGTGAT CGTCAAGGCC
GCCACCACCG GCAAGATCGG CGACGGCAAG GTGTGGGTGA CGCCGGTCGA GGACGTGGTG
CGGGTGCGCA CCGGCGAGCA CGGTGGCAGC GCTCTGTAG
 
Protein sequence
MKLITAVIKP FKLDEVKNAL RSFGVHGITI TEVSGSGRQR GHTEVYRGAE YTVDLVPKVR 
IEVLCEDEDT DDLVNVIVKA ATTGKIGDGK VWVTPVEDVV RVRTGEHGGS AL