Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4777 |
Symbol | |
ID | 8336131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5439693 |
End bp | 5440538 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644957877 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_003115479 |
Protein GI | 256393915 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.266614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTCGG ACTCGGTGGC CGGCGAAGAG ATGCTTCGCG AGGAAGCGTC TGGCGAGCAA ACGGCTGGCG AGGTGATGGC TGGCGGCGTC AACACGGTCC TGAGAATCGG CGACCGGGTC CACCGGCCAG CGGGGGAGTG GACTCCGACT GTGCACGCCC TGCTGGCGCA CCTGGCGTCG AAGGGCTTCA CCGCTGCGCC GCGTGCTCAT GGCTTCGATG CCGAGGGTCG GGAGGTGGTC GATTTCGTGG TCGGTGATGT GCCGGGGTCC GAGGTCGTCG TCTCCGACGA AGCGCTTGCC GACATGGCTC TCCTGCTGCG TGGCCTGCAT GATGCGAGCA CTGACTTCGT GCCGCCGGCC GGTGCCTCGT GGTACTTCGA GCCTCGGGAG CCGGCCGAAG TGATCTGCCA CGGGGATGTG GCGCCGTACA ACACTGTCTT CCGTGACGGT CGTCCGGTGG CCCTGATCGA CTTCGACACC GCGCATCCCG CGCCTCGTGT CTGGGACGTC GCCTATGCGG CTTACCGCTT CGTGCAGCTC GTCGACGAGG ATGCGGAGGC GGAAGCGGTT GTCGGTGAGC AAGCGCGGCG CCTGGCGCTC TTCGCTGACG CCTACGGTCT CGGCGCGCGG GACCGGGCTG CGGTGGTCGG CATGGTGGTG GCGCGGCTCA GGCATCTGAT CGGATTTATG CGGCGCCAAG CGGCTGCGGG GCATCCGGGG TTCGGCCGGC ATGTCGCCGA GGGGCACGAC GGCTACTACC TGCGGAACAT CGCCTATGTC GAGCGGCATC GCGCTGCGTT CGACGCGGCG CTGGCGGGGC GGGATTCCTC AGGGAACTCA TCGTGA
|
Protein sequence | MSSDSVAGEE MLREEASGEQ TAGEVMAGGV NTVLRIGDRV HRPAGEWTPT VHALLAHLAS KGFTAAPRAH GFDAEGREVV DFVVGDVPGS EVVVSDEALA DMALLLRGLH DASTDFVPPA GASWYFEPRE PAEVICHGDV APYNTVFRDG RPVALIDFDT AHPAPRVWDV AYAAYRFVQL VDEDAEAEAV VGEQARRLAL FADAYGLGAR DRAAVVGMVV ARLRHLIGFM RRQAAAGHPG FGRHVAEGHD GYYLRNIAYV ERHRAAFDAA LAGRDSSGNS S
|
| |