Gene Caci_4777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4777 
Symbol 
ID8336131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5439693 
End bp5440538 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content68% 
IMG OID644957877 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003115479 
Protein GI256393915 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.266614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGG ACTCGGTGGC CGGCGAAGAG ATGCTTCGCG AGGAAGCGTC TGGCGAGCAA 
ACGGCTGGCG AGGTGATGGC TGGCGGCGTC AACACGGTCC TGAGAATCGG CGACCGGGTC
CACCGGCCAG CGGGGGAGTG GACTCCGACT GTGCACGCCC TGCTGGCGCA CCTGGCGTCG
AAGGGCTTCA CCGCTGCGCC GCGTGCTCAT GGCTTCGATG CCGAGGGTCG GGAGGTGGTC
GATTTCGTGG TCGGTGATGT GCCGGGGTCC GAGGTCGTCG TCTCCGACGA AGCGCTTGCC
GACATGGCTC TCCTGCTGCG TGGCCTGCAT GATGCGAGCA CTGACTTCGT GCCGCCGGCC
GGTGCCTCGT GGTACTTCGA GCCTCGGGAG CCGGCCGAAG TGATCTGCCA CGGGGATGTG
GCGCCGTACA ACACTGTCTT CCGTGACGGT CGTCCGGTGG CCCTGATCGA CTTCGACACC
GCGCATCCCG CGCCTCGTGT CTGGGACGTC GCCTATGCGG CTTACCGCTT CGTGCAGCTC
GTCGACGAGG ATGCGGAGGC GGAAGCGGTT GTCGGTGAGC AAGCGCGGCG CCTGGCGCTC
TTCGCTGACG CCTACGGTCT CGGCGCGCGG GACCGGGCTG CGGTGGTCGG CATGGTGGTG
GCGCGGCTCA GGCATCTGAT CGGATTTATG CGGCGCCAAG CGGCTGCGGG GCATCCGGGG
TTCGGCCGGC ATGTCGCCGA GGGGCACGAC GGCTACTACC TGCGGAACAT CGCCTATGTC
GAGCGGCATC GCGCTGCGTT CGACGCGGCG CTGGCGGGGC GGGATTCCTC AGGGAACTCA
TCGTGA
 
Protein sequence
MSSDSVAGEE MLREEASGEQ TAGEVMAGGV NTVLRIGDRV HRPAGEWTPT VHALLAHLAS 
KGFTAAPRAH GFDAEGREVV DFVVGDVPGS EVVVSDEALA DMALLLRGLH DASTDFVPPA
GASWYFEPRE PAEVICHGDV APYNTVFRDG RPVALIDFDT AHPAPRVWDV AYAAYRFVQL
VDEDAEAEAV VGEQARRLAL FADAYGLGAR DRAAVVGMVV ARLRHLIGFM RRQAAAGHPG
FGRHVAEGHD GYYLRNIAYV ERHRAAFDAA LAGRDSSGNS S