Gene Caci_4730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4730 
Symbol 
ID8336084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5396190 
End bp5397017 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID644957830 
ProductHydroxypyruvate isomerase 
Protein accessionYP_003115432 
Protein GI256393868 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTCC GCTTCGACAT CAACCTCTCG ATCCTGTTCA CCGAACTGCC GCTGCTGGAC 
CGTCCCGCCG CGGCGCGCGC CGCCGGCTTC ACCGCCGCGG AGTTCTGGTG GCCGTTCGGG
ACCGAGGCGG TTCCCTCCGA TAAGGACGTG GACGCGTTCA CCGGCGCGCT GGACGACGCC
GGGGTCCGCC TGGTCGGGCT GAACTTCCTG GACGACCTGT CGGTCGGCGC GCGCGGTCTG
GTCTCCGTAC CCGAACACGC CAAGCGCTTC CGCGACAGCA TCGACGTGGC CGTCGGGATC
GCCGAGCGGA CCGGCTGCCG GAACCTGAAT GCCTTGTACG GCAACAGGAT CGAGGGCGGT
TCGGACCTCC AGCAGCAGGA AGCCGCCCTG GAGAACCTGG CCGCGGCCAC CGCCGCCGCC
TCCCGGATCG GCGCGACCGT CCTGCTCGAA GCGCTGAACG CGATCGAGTC CCCGGCGTAC
CCGATCACCT CCAGCGCGGC AGCGCTGGCC GAGATCGACC GGGTCTCAGC CGCGACCGGC
GCGACCAACC TGGCCTTCCT GTGCGACCTC TACCACCTGG CGCGCATGGA CGAGGACCTG
TTCGCGACCA TCGCCGCGCA CGCCGATCGC TTCGGGCACG TCCAGATCGC CGACACCCCG
GCGCGCGGCG AACCCGACAG CGGCGCCCTG GACTTCTCGG CGCTGTTCAA GGCCCTGACC
GAGGCCGGCT ACACCGCCGA GTCCGGCCGC GGCTGGATCG GGCTGGAGTA CAAGCCCTCC
ACCGGCATCA CCACTGACAG CTTCGAATGG ATGGAATCCC TTTCATGA
 
Protein sequence
MTLRFDINLS ILFTELPLLD RPAAARAAGF TAAEFWWPFG TEAVPSDKDV DAFTGALDDA 
GVRLVGLNFL DDLSVGARGL VSVPEHAKRF RDSIDVAVGI AERTGCRNLN ALYGNRIEGG
SDLQQQEAAL ENLAAATAAA SRIGATVLLE ALNAIESPAY PITSSAAALA EIDRVSAATG
ATNLAFLCDL YHLARMDEDL FATIAAHADR FGHVQIADTP ARGEPDSGAL DFSALFKALT
EAGYTAESGR GWIGLEYKPS TGITTDSFEW MESLS