Gene Caci_4675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4675 
Symbol 
ID8336029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5323663 
End bp5324670 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content74% 
IMG OID644957775 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003115377 
Protein GI256393813 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAC TCGCCGAAGT GGCGAAGCAC GCGGGAGTCT CGCCGAGCAC GGTCTCCTAT 
GTTCTCAGCG GCAAGCGCTC CATCTCGGAC TCCACGCGCG TGCGCGTGCA GGCGGCGATC
GACGCGCTGG GCTACCACCC CAACGCCGGC GCGCGGGCGC TGGCCAGCAG CAAGTCGCAC
ATCGTGGCGC TGGTCGTGCC GCTGCGCACC GACCTGTACG TGCCGGTGAT GATGCAGATC
GCGATCGCGG TCACCACCAC CGCCCGGCAG TACGGGCACG ACGTGCTGCT GATCACCAAC
GACGAGGGAC CCGAGGGCGT GCGCCGGGTG GCCGGCAGCG GCCTGGCCGA CGGCGTGATC
CTGATGGACG TGGAGCTGGA GGACGAGCGG GTGGAGGTCC TGCGCCGCCA CGGCACCCGC
GCCTCGCTGA TCGGCCTGCC CGCCGACCCG GCCGGGCTGT CCTGCGTGGA CCTGGACTTC
GCCGCCGCCG GCGCGACCGC CGCCGACCAC CTGGCGGACC TCGGCCACCA CGAGATCGCG
TTCATCGGCC AGAGCGAGGG CGTCTACCGC CGCCACACCG GCTTCGCCGA GCGCACCCTC
GCCGGGTTCC AGGAGCGGTG CCAGACGCGC GGGCTGCGGG CCGTCCACCG GCCCTGCGAC
GCCTCGTTCG AGGGCGCGGC CGGCGTGCTG GCGCGCATCT TCGAGGACCG GCCGGACACC
ACCGGGCTGG TCGTGCAGAA CGAGGCGATG ATCGCGCCGC TGCTGGGACT GCTGCGCTCG
TCGGGACGCA CGGTCCCGGA GGAGGTGTCG ATCGTGGCGA TCGGCCCGGA CGAGCCGGTG
GCGGTGCAGA CCTCGCCGCG CCTGACGACG ATTCCGGTAC CCGCCCAGGA ACTCGGGCGG
CAGGCGGTGG AGATGCTGCT GGGACCGGAC GCCGGGAACT CGGGCGTGAC GCTGCTGCCG
CCGACGCTGT CGGTGCGGGA GAGCACGGCG CCGGCGCCGG GGCGTTAG
 
Protein sequence
MATLAEVAKH AGVSPSTVSY VLSGKRSISD STRVRVQAAI DALGYHPNAG ARALASSKSH 
IVALVVPLRT DLYVPVMMQI AIAVTTTARQ YGHDVLLITN DEGPEGVRRV AGSGLADGVI
LMDVELEDER VEVLRRHGTR ASLIGLPADP AGLSCVDLDF AAAGATAADH LADLGHHEIA
FIGQSEGVYR RHTGFAERTL AGFQERCQTR GLRAVHRPCD ASFEGAAGVL ARIFEDRPDT
TGLVVQNEAM IAPLLGLLRS SGRTVPEEVS IVAIGPDEPV AVQTSPRLTT IPVPAQELGR
QAVEMLLGPD AGNSGVTLLP PTLSVRESTA PAPGR