Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4675 |
Symbol | |
ID | 8336029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5323663 |
End bp | 5324670 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644957775 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003115377 |
Protein GI | 256393813 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACAC TCGCCGAAGT GGCGAAGCAC GCGGGAGTCT CGCCGAGCAC GGTCTCCTAT GTTCTCAGCG GCAAGCGCTC CATCTCGGAC TCCACGCGCG TGCGCGTGCA GGCGGCGATC GACGCGCTGG GCTACCACCC CAACGCCGGC GCGCGGGCGC TGGCCAGCAG CAAGTCGCAC ATCGTGGCGC TGGTCGTGCC GCTGCGCACC GACCTGTACG TGCCGGTGAT GATGCAGATC GCGATCGCGG TCACCACCAC CGCCCGGCAG TACGGGCACG ACGTGCTGCT GATCACCAAC GACGAGGGAC CCGAGGGCGT GCGCCGGGTG GCCGGCAGCG GCCTGGCCGA CGGCGTGATC CTGATGGACG TGGAGCTGGA GGACGAGCGG GTGGAGGTCC TGCGCCGCCA CGGCACCCGC GCCTCGCTGA TCGGCCTGCC CGCCGACCCG GCCGGGCTGT CCTGCGTGGA CCTGGACTTC GCCGCCGCCG GCGCGACCGC CGCCGACCAC CTGGCGGACC TCGGCCACCA CGAGATCGCG TTCATCGGCC AGAGCGAGGG CGTCTACCGC CGCCACACCG GCTTCGCCGA GCGCACCCTC GCCGGGTTCC AGGAGCGGTG CCAGACGCGC GGGCTGCGGG CCGTCCACCG GCCCTGCGAC GCCTCGTTCG AGGGCGCGGC CGGCGTGCTG GCGCGCATCT TCGAGGACCG GCCGGACACC ACCGGGCTGG TCGTGCAGAA CGAGGCGATG ATCGCGCCGC TGCTGGGACT GCTGCGCTCG TCGGGACGCA CGGTCCCGGA GGAGGTGTCG ATCGTGGCGA TCGGCCCGGA CGAGCCGGTG GCGGTGCAGA CCTCGCCGCG CCTGACGACG ATTCCGGTAC CCGCCCAGGA ACTCGGGCGG CAGGCGGTGG AGATGCTGCT GGGACCGGAC GCCGGGAACT CGGGCGTGAC GCTGCTGCCG CCGACGCTGT CGGTGCGGGA GAGCACGGCG CCGGCGCCGG GGCGTTAG
|
Protein sequence | MATLAEVAKH AGVSPSTVSY VLSGKRSISD STRVRVQAAI DALGYHPNAG ARALASSKSH IVALVVPLRT DLYVPVMMQI AIAVTTTARQ YGHDVLLITN DEGPEGVRRV AGSGLADGVI LMDVELEDER VEVLRRHGTR ASLIGLPADP AGLSCVDLDF AAAGATAADH LADLGHHEIA FIGQSEGVYR RHTGFAERTL AGFQERCQTR GLRAVHRPCD ASFEGAAGVL ARIFEDRPDT TGLVVQNEAM IAPLLGLLRS SGRTVPEEVS IVAIGPDEPV AVQTSPRLTT IPVPAQELGR QAVEMLLGPD AGNSGVTLLP PTLSVRESTA PAPGR
|
| |