| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4650 |
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| Symbol | |
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| ID | 8336004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5286996 |
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| End bp | 5288057 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957750 |
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| Product | male sterility domain protein |
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| Protein accession | YP_003115352 |
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| Protein GI | 256393788 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.458104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.580556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACA CGATCGTCTT CGGCGCCACC GGCTTCATCG GCCGCCCCCT CGTCCGCGAA
CTCCTGGCGC GCGGACACCA CGTCGCCGCC GCGGTCCGCG ACGCCCGCAC ATCCGGCGAC
CGCCTCACAG CCTGGCTCGC CGACCACCAC ACCGACACCA CCCACCTGAC CATCGTCGAA
GCCGACATCA CCACCGAGCA CCTCGGCATA CCCCCCGACA CCCTCGCCGG CATCCGCGAC
GTCTACAACA CCGCCGGCCG CTACGCCTTC GGCCTCACCG CCGCCGAAGC CAAAGCCGCC
AACGTCACCG GCGCGCGCCA CGTCGTGCAA TGGGCCGCGG CACGCCCGAA CCTGCGCCGC
CTGGTCCACA TCAGCGGCTA CCGCGTCTCC GGCGCCGACA GCCCGCCGCC GGACTACCGC
AAACTCGGCG CGTATGAGGC CTCGAAGATC GAAGGGGACG CGGTCGTGCG CACCCGCGCC
CGCGAACTCG GCGTGCCGCT GACCATCGCC AACCCCAGCA CTGTCATCGG CGAAGGCCAG
TACATCGGTC TGGCCACGAT GGTCGCCGAC CTGTGGCACG GCCGCCTGCC GGCGCTGCCG
GGCGGCCGCG ACGTGTTCGT GCCCGTCGTC ACCCTCGACC ACCTCGTCCA GGTCCTGGCG
AACATCCCCG AGCACGAGGC CACCGCCGGG CAGGCGTACT GGATCCTGGA CGACACCACC
CCGAACCTGC CCGACCTCAT AAGGCATATC GCAGATCACC TCGGCGTGAA GGCACCGAAA
CGCTCCATCC CGGTCGGGCT GCTCCGAAGG CTGCCGCGCG CGCTGACCGG AGCAGACCCC
GAGACCTTGT CGTTCCTGTC GACCGACCGC TATCCGACCG CCGCGGCAAA CGCGTTCGCC
AAGGCCACCG GCGTGCGCAT CCCGGCAGTG ACCGACGCGC TCAACGACTG GGCCGACCAC
CTGGTCGCGA CCCGATTCGG GACCGTGCCG GAGCCGCGAG AAGAAACACG TCGGGTCCCG
GTGCACGACC GCGCACCGGG ACCCGACGAA CCGCTGCGTT GA
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| Protein sequence | MPDTIVFGAT GFIGRPLVRE LLARGHHVAA AVRDARTSGD RLTAWLADHH TDTTHLTIVE
ADITTEHLGI PPDTLAGIRD VYNTAGRYAF GLTAAEAKAA NVTGARHVVQ WAAARPNLRR
LVHISGYRVS GADSPPPDYR KLGAYEASKI EGDAVVRTRA RELGVPLTIA NPSTVIGEGQ
YIGLATMVAD LWHGRLPALP GGRDVFVPVV TLDHLVQVLA NIPEHEATAG QAYWILDDTT
PNLPDLIRHI ADHLGVKAPK RSIPVGLLRR LPRALTGADP ETLSFLSTDR YPTAAANAFA
KATGVRIPAV TDALNDWADH LVATRFGTVP EPREETRRVP VHDRAPGPDE PLR
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