| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4634 |
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| Symbol | |
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| ID | 8335988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5270024 |
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| End bp | 5271700 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644957734 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003115336 |
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| Protein GI | 256393772 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.116644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGC TCGGTAGTCG TTCGGAAGCC GTGCAGGCAG GCGGCGATGC GGGTCAGGCC
AAACAGACGT CCTGGTCCGC GATGGAGGTG GTCGCGGTGT CCGGTCAGAA TTCGTCCACG
GCGCATGCCG AAGCGGCCGC GCCGCGCTCT TCCGCGCCGT GGTCGGACGA GCTCACGGGG
CTGCCGAACC GGGCGATGCT GGGCCGGTGG CTGGAGGCGC GCACCGGCCC GCGGGCCCGG
CCGGGGCAGC GGATCGGTTT GTGCAGCCTG GACCTGGACG GGTTCCGGCA GATCAACGCC
CTGCTGGGGT TCGGCGCCGG GGACCGGTTC CTGGCGGCGG TGGCGACCCG GCTGCGGGCG
GTGCTGGAGC CCGGCGGGCA TCTGCTGGCG CGCACCGGGG GTGATGAGTT CGCGGTGCTG
GTCGACTACG GCGACCACGG CGCGGGCACG GCCGCAGCGG CGGCCACAGG CAACGGGAGC
AACGGCAGCA ACGGCACTGC TGCCAGCTCC GGCCCTGGCC CTGGCCCTGG CTCAAGCTCA
GGTTCCGGGA CGTCCGGCGA CCCGGCGGCA CCGCAGGGTG CTGAGGCGCC GCGCCGCTCG
GCCTCAAGCC GTCCCATCGT GGAGCGGGTC GCCGAGCGGG TGCTGGCGGC GCTGCGGGAC
CCGCTGCGCG TGGAGGGCAG AGACCTGACG GTCACCGCCT CGATCGGCGC GGTCGAGGCC
CTGGCGGCGG CCTCGGCGCC GGAGGACCTG CTGCGCGCGG CGGATCTGGC GCTGTACTGG
GCCAAGGGCG AGGGCCGGGA CCGGTGGACG CTGTTCGACG CCGAGCGCGC CGGGGCGGAC
GTGGCCCGGT ACCGGCTGGC GGCGGACCTG CCGGCGGCGG TGGAGTCCGG GCAGTTCTAC
TGCGAGTACC AGCCGATCGT GTCGCTGTCC GACGGCGCCG TGACCGGCGT GGAGGCGCTG
GTGCGCTGGC GGCATCCGCG GTTCGGGATC GTGCCGCCGG ACCGGTTCAT CTCGCTGGCC
GAGGACTCCG GGCTGATCGT GGAGCTGGGC CGGCGCATCC TGTCCGAGGC GTGCCAGGCG
GCGGCGACGT GGCCGGACGC GCCGGGGCAG CCGGCGCCGC CGGTGTCGGT GAACGTCGCG
GTGCGCCAGT GCCGGGACCC GCGGCTGATG GGGCACGTGC TCTCGGCGCT CGCCGAGTCC
GGGCTGGCGC CGCAGCGGCT GCGGCTGGAG ATCACCGAGT CGGCGCTGCT GCCCGGCGAC
GACGCGGCGC AGGCGACGCT GCGGGCGCTG GCCGACAAGG GCGTGGCGAT CGCCGTCGAC
GACTTCGGGA CCGGCTATTC GAACCTCTCG CATCTGCGGC GGCTGCCGGT GCACATCCTG
AAGATCGACG GCACGTTCGT CGCCGGACTC GCCTCAGCAG GCGCGGTCGG CGCGGCCGCG
GGCGCAGCCG GTACGACGGG TCCGTGCGGC GCCGACGAGC AGATCATCGC CACGGTCACC
GCGCTCGGAC ACGCCCTGGG CCTGACAGTG ACCGCCGAGG GTGTGGAGAC CGCCGGGCAG
CTGGAGACGG TGCGCCGCCT CGGAGTCGAC ACCGGGCAGG GCTGGCTGTT CTCCCGGGCG
CTGCCGGCCG CCGGAATCCT GGACCTGCTG GCGCGCGGGG CGCCGCTGGC CGCCTGA
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| Protein sequence | MIALGSRSEA VQAGGDAGQA KQTSWSAMEV VAVSGQNSST AHAEAAAPRS SAPWSDELTG
LPNRAMLGRW LEARTGPRAR PGQRIGLCSL DLDGFRQINA LLGFGAGDRF LAAVATRLRA
VLEPGGHLLA RTGGDEFAVL VDYGDHGAGT AAAAATGNGS NGSNGTAASS GPGPGPGSSS
GSGTSGDPAA PQGAEAPRRS ASSRPIVERV AERVLAALRD PLRVEGRDLT VTASIGAVEA
LAAASAPEDL LRAADLALYW AKGEGRDRWT LFDAERAGAD VARYRLAADL PAAVESGQFY
CEYQPIVSLS DGAVTGVEAL VRWRHPRFGI VPPDRFISLA EDSGLIVELG RRILSEACQA
AATWPDAPGQ PAPPVSVNVA VRQCRDPRLM GHVLSALAES GLAPQRLRLE ITESALLPGD
DAAQATLRAL ADKGVAIAVD DFGTGYSNLS HLRRLPVHIL KIDGTFVAGL ASAGAVGAAA
GAAGTTGPCG ADEQIIATVT ALGHALGLTV TAEGVETAGQ LETVRRLGVD TGQGWLFSRA
LPAAGILDLL ARGAPLAA
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