| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4609 |
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| Symbol | |
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| ID | 8335963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5246261 |
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| End bp | 5247448 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644957709 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_003115311 |
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| Protein GI | 256393747 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.919573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000074817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTTTGGC TCCGCCGCCC GGACCCCCGG CGCGACATCG CGGTGTCCGC GGCCGTGGTG
CCCGGCGACC CGGAGGCCGG CGGCACGCCG GTGACGGTGA CGCCGGCGCA TTCGACGTGG
ACGCAGCGGC TGGTGCCGTA CCTGTTCATC GCGGTCATCG TCGGCGCGGA CCTGGCCACG
CCGAAGGAAG TCACCTTCTC CTCGACCCTG TCGGTCGCCC CGGCACTGTC GGCACTGCTG
ACCCGTTCGG TGTTCCAGAC GATCTGCACC TCCATCACCG CCATCGGCGT CTCGGCGGTG
CTGTACACCT ATTCGCTGCA CGTCGCCGGC GAGGTGGAGG TCGCCGCGTG CGGCGCGATC
CTGGTGGTGA CGGTCGTCAG CGCCGTCAGC CTGGGCCTGG TGGGGCGGCA GTCGCGGATG
CTGGCGAACG TGCGCAGCGT CGCGGAGACC GCGCAGCACG TGGTGCTGCG GGAGGTGCCG
CCGGAGCTGA CGCAGGTCCG CACCGCGGTG GCCTACCGCG CCGCAGCCGC CGAGGCCCGC
ATCGGCGGCG ACCTGTACGA GGCGCTGTCG ACGCGCTTCG GCGACCGGCT GCTCATCGGC
GACGTACGCG GCAAGGGCCT GCCGGCGGTC GAGGCAGCCG CCGACGTCCT CGGCGTGTTC
CGGGAGGCGG CATACACCGA GGCCGACCTG TCCCGCGTCG CCGACCGCAT GCACGCGATG
CTGGCCCGCC GCCCAGCCGG CACCGAGGAG TTCGTCACCG CCGTCCTGCT CTCCGTCCAC
CCCGAACGCC CCACCGTGGA AGTCGTCAAC TGCGGCCACC CCCCACCCCT GCTGATGCGC
GACGGCCACG TCGCCGCCCT AGCGCCAGCC GAACCCGGCC CACCCCTGGG CCTGTTCGAC
CTGGCCACCC CATCCGGCAG CGCCTCAGCA CCGGCCTCAG CCCGCTTCGC CCCCGGCGAC
ACCCTCCTGC TCTACACCGA CGGCACCACC GAAGCCCGCG ACCACACCGG CCGCTTCTTC
GACCTCCCCG CCTTCCTCAC CGGCCGCCCC GCAACCAGCC CAGCGGAGCT GACCCGCCAG
ATCCTCACCG GCCTGGCAGC ACACGCCGGC GCGCGCCTGG ACGACGACGT GGCGCTGCTG
GTGGTGCGGC GCAAGCCGTA TGTGCCGGGG CCGGCGGCGG AGGTTTAG
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| Protein sequence | MVWLRRPDPR RDIAVSAAVV PGDPEAGGTP VTVTPAHSTW TQRLVPYLFI AVIVGADLAT
PKEVTFSSTL SVAPALSALL TRSVFQTICT SITAIGVSAV LYTYSLHVAG EVEVAACGAI
LVVTVVSAVS LGLVGRQSRM LANVRSVAET AQHVVLREVP PELTQVRTAV AYRAAAAEAR
IGGDLYEALS TRFGDRLLIG DVRGKGLPAV EAAADVLGVF REAAYTEADL SRVADRMHAM
LARRPAGTEE FVTAVLLSVH PERPTVEVVN CGHPPPLLMR DGHVAALAPA EPGPPLGLFD
LATPSGSASA PASARFAPGD TLLLYTDGTT EARDHTGRFF DLPAFLTGRP ATSPAELTRQ
ILTGLAAHAG ARLDDDVALL VVRRKPYVPG PAAEV
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