Gene Caci_4608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4608 
Symbol 
ID8335962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5245251 
End bp5246036 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID644957708 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_003115310 
Protein GI256393746 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.110693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000204361 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGGTGC GGGTGGCGAC GTGGAATGTG AATTCGGTGA CGGCGCGGGT CGAGCGGCTG 
GTGGGCTGGT TGGACTCGGC GAAGCCGGAT GTGGTGTGTC TTCAGGAGTT GAAGACCACC
GATGAGGCTT TCCCGGCCGG GCAGTTGGCT GATGTGGGGT ATCAGGCGGC GACGTGGGGG
ACGGGCCGGT GGAACGGTGT GGCGATTCTG TCGCGGCTGC CGATTGCTGA TGTGTGGCGG
GGTTGGCCGG ATCTGCCGGA TTTCGACGGG GTCGCCGAAC CGCGGGCTTT GACTGCCACC
TGTGGTGGTG TGCGGGTGAC GTGTGTGTAT GTGCCCAATG GCCGGGAGTT GGGGCATCCG
CATTTTGATT ACAAGCTGCG CTGGTTGGAT TCGTTGACGG CGTCGGTGGC TGAGCCGGCG
CGGGGGGAGT TGCCGTATGC GGTGTTGGGG GATTTCAACA TCGCTCCGAC CGATGCCGAT
GTGTGGGACA TGTCGTTGTT TGCCGAGTCC ACGCATGTGA CGCCGGCTGA GCGGGCGAAG
TTGGCCGATC TTGAGGCGCA GGGCCTGGTG GAGGTGCTGC CTCGGGCATT GAAGTACGAC
AAGCCGTATA CGTATTGGGA TTATCGGCAG TTGGCGTTCC CGAAGAACAA CGGCATGCGG
ATCGATCTGG TGTTCGGCAA TGCGGCGTTC GCCGGGGCGG TGCGCGACGC GTATGTGGAC
CGGGAGGAGC GCAAGGGCAA GGGCGCCTCG GACCACGCGC CGGTGGTGGT GGATCTCGAT
GTGTAG
 
Protein sequence
MVVRVATWNV NSVTARVERL VGWLDSAKPD VVCLQELKTT DEAFPAGQLA DVGYQAATWG 
TGRWNGVAIL SRLPIADVWR GWPDLPDFDG VAEPRALTAT CGGVRVTCVY VPNGRELGHP
HFDYKLRWLD SLTASVAEPA RGELPYAVLG DFNIAPTDAD VWDMSLFAES THVTPAERAK
LADLEAQGLV EVLPRALKYD KPYTYWDYRQ LAFPKNNGMR IDLVFGNAAF AGAVRDAYVD
REERKGKGAS DHAPVVVDLD V