Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4608 |
Symbol | |
ID | 8335962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5245251 |
End bp | 5246036 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644957708 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_003115310 |
Protein GI | 256393746 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.110693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000204361 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGGTGC GGGTGGCGAC GTGGAATGTG AATTCGGTGA CGGCGCGGGT CGAGCGGCTG GTGGGCTGGT TGGACTCGGC GAAGCCGGAT GTGGTGTGTC TTCAGGAGTT GAAGACCACC GATGAGGCTT TCCCGGCCGG GCAGTTGGCT GATGTGGGGT ATCAGGCGGC GACGTGGGGG ACGGGCCGGT GGAACGGTGT GGCGATTCTG TCGCGGCTGC CGATTGCTGA TGTGTGGCGG GGTTGGCCGG ATCTGCCGGA TTTCGACGGG GTCGCCGAAC CGCGGGCTTT GACTGCCACC TGTGGTGGTG TGCGGGTGAC GTGTGTGTAT GTGCCCAATG GCCGGGAGTT GGGGCATCCG CATTTTGATT ACAAGCTGCG CTGGTTGGAT TCGTTGACGG CGTCGGTGGC TGAGCCGGCG CGGGGGGAGT TGCCGTATGC GGTGTTGGGG GATTTCAACA TCGCTCCGAC CGATGCCGAT GTGTGGGACA TGTCGTTGTT TGCCGAGTCC ACGCATGTGA CGCCGGCTGA GCGGGCGAAG TTGGCCGATC TTGAGGCGCA GGGCCTGGTG GAGGTGCTGC CTCGGGCATT GAAGTACGAC AAGCCGTATA CGTATTGGGA TTATCGGCAG TTGGCGTTCC CGAAGAACAA CGGCATGCGG ATCGATCTGG TGTTCGGCAA TGCGGCGTTC GCCGGGGCGG TGCGCGACGC GTATGTGGAC CGGGAGGAGC GCAAGGGCAA GGGCGCCTCG GACCACGCGC CGGTGGTGGT GGATCTCGAT GTGTAG
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Protein sequence | MVVRVATWNV NSVTARVERL VGWLDSAKPD VVCLQELKTT DEAFPAGQLA DVGYQAATWG TGRWNGVAIL SRLPIADVWR GWPDLPDFDG VAEPRALTAT CGGVRVTCVY VPNGRELGHP HFDYKLRWLD SLTASVAEPA RGELPYAVLG DFNIAPTDAD VWDMSLFAES THVTPAERAK LADLEAQGLV EVLPRALKYD KPYTYWDYRQ LAFPKNNGMR IDLVFGNAAF AGAVRDAYVD REERKGKGAS DHAPVVVDLD V
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