Gene Caci_4607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4607 
Symbol 
ID8335961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5244601 
End bp5245233 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content71% 
IMG OID644957707 
Producthypothetical protein 
Protein accessionYP_003115309 
Protein GI256393745 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03085] conserved hypothetical protein TIGR03085 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0303145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000208711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAACCC ATGCACGCGC TGAGCGCGCT CACCTCGCCC AAGTGTTGAC CGATGCCGGT 
CCGGATGCCC CGACGTTGTG CCAGGGGTGG ACGACGCGGG ATTTGGCGGC GCATGTGGTG
GTGCGGGAGC GGCGGCTGGA TGCCGCCGGC GGGATCATGA TGAAGGCGTT GGCGCCGCGG
CTGGCGCGGG TGCAGGCGGA GTTCGCGGCG CGTCCGTGGC CGGAGTTGGT GGAGATGGTG
GCCGCCGGGC CGTCGAAGCG GTCGCTGTTG GGGGTGGCGG CGGTGGATGA GGCGGCGAAT
GTTGTGGAGT TCTTCGTGCA TTGTGAGGAT GTGCGGCGGG CCAAGCCGGG GTGGGAGCCG
CGGGTGCTGG ATCCGGAGTT GGCTGAGGTG TTGTGGAAGC GGGCTTCGGG GATGGCGAAG
CTGGTGGGGC GGCGCGCGCC GGCGGGTTTG GTGTTGCGGC GCCCGGATGG GCAGACGGCG
GTGGCGCATA AGGGGGCGCC GGTGGTGACG GTGACTGCTG ATCCGGGGGA GTTGGTGATG
TTCATGTCGG GGCGGCAGGG GCATTCGGTG GTGGAGATGG AGGGTCCGGA GCAGGCGGTG
GCGGCGGTCC GCGGCGCGAA GTTCGGGCTG TGA
 
Protein sequence
MGTHARAERA HLAQVLTDAG PDAPTLCQGW TTRDLAAHVV VRERRLDAAG GIMMKALAPR 
LARVQAEFAA RPWPELVEMV AAGPSKRSLL GVAAVDEAAN VVEFFVHCED VRRAKPGWEP
RVLDPELAEV LWKRASGMAK LVGRRAPAGL VLRRPDGQTA VAHKGAPVVT VTADPGELVM
FMSGRQGHSV VEMEGPEQAV AAVRGAKFGL