Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4607 |
Symbol | |
ID | 8335961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5244601 |
End bp | 5245233 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644957707 |
Product | hypothetical protein |
Protein accession | YP_003115309 |
Protein GI | 256393745 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03083] uncharacterized Actinobacterial protein TIGR03083 [TIGR03085] conserved hypothetical protein TIGR03085 |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0303145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000208711 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGAACCC ATGCACGCGC TGAGCGCGCT CACCTCGCCC AAGTGTTGAC CGATGCCGGT CCGGATGCCC CGACGTTGTG CCAGGGGTGG ACGACGCGGG ATTTGGCGGC GCATGTGGTG GTGCGGGAGC GGCGGCTGGA TGCCGCCGGC GGGATCATGA TGAAGGCGTT GGCGCCGCGG CTGGCGCGGG TGCAGGCGGA GTTCGCGGCG CGTCCGTGGC CGGAGTTGGT GGAGATGGTG GCCGCCGGGC CGTCGAAGCG GTCGCTGTTG GGGGTGGCGG CGGTGGATGA GGCGGCGAAT GTTGTGGAGT TCTTCGTGCA TTGTGAGGAT GTGCGGCGGG CCAAGCCGGG GTGGGAGCCG CGGGTGCTGG ATCCGGAGTT GGCTGAGGTG TTGTGGAAGC GGGCTTCGGG GATGGCGAAG CTGGTGGGGC GGCGCGCGCC GGCGGGTTTG GTGTTGCGGC GCCCGGATGG GCAGACGGCG GTGGCGCATA AGGGGGCGCC GGTGGTGACG GTGACTGCTG ATCCGGGGGA GTTGGTGATG TTCATGTCGG GGCGGCAGGG GCATTCGGTG GTGGAGATGG AGGGTCCGGA GCAGGCGGTG GCGGCGGTCC GCGGCGCGAA GTTCGGGCTG TGA
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Protein sequence | MGTHARAERA HLAQVLTDAG PDAPTLCQGW TTRDLAAHVV VRERRLDAAG GIMMKALAPR LARVQAEFAA RPWPELVEMV AAGPSKRSLL GVAAVDEAAN VVEFFVHCED VRRAKPGWEP RVLDPELAEV LWKRASGMAK LVGRRAPAGL VLRRPDGQTA VAHKGAPVVT VTADPGELVM FMSGRQGHSV VEMEGPEQAV AAVRGAKFGL
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