| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4560 |
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| Symbol | |
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| ID | 8335914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5188625 |
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| End bp | 5189350 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644957661 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003115263 |
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| Protein GI | 256393699 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.84586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGA CCGGACACCG GGTCGTCGTC ATCGGCGGCA GCTCGGGCAT GGGACTGGCG
ACGGCCCGGG CGGCGGCGCT CGCCGGCGCG AGCGTGACGA TCGCCTCGAG CGACAAGGGG
CGCCTGGACG CGGCGCTCGC CGACCTGCCC GACGGCTGCG CCGGCGTCGT GGCCGACACC
ACGGACGAGG ACGCCGTCGC GGCGCTGTTC CAGCAGGTGG GCCGCCTGGA CCACCTCGTC
TACACCGCCG GCGACGCGGT CGCGCCGCAC CCGGTGGCCG AGCTGCCGCT CGCCGAGGCG
CGCCGGCGGC TGGACGTGCG CTTCTGGGGC TCGGTCGCGG CGGTGAAGCA CGCGATCCCG
TACCTGAGTC CGACCGGCTC GATCTCGGTC ACCTCCGGCA CCGTCGGCGT GCGCCCGGTC
CCCGGCTTCG CCCTCGGCGC GGCCGGCGTC GGCGCGATCG AGGGTCTGGC GCGAGGCCTG
GCGGTGGAGC TGGCGCCGAT CCGGGTGAAC GTGGTCCGCG CCGGCGCCAT CCGCACGCCG
ATGTGGGACC GCGTCCCGGA GACGCAGCGC GCGACGATGT TCGCCGCGAT GGCGAAGCGG
ACCCTGACCG GCACGATCGG CGAGGCGGAG CAGATCGCCG CGACGCATCT GTACTTGATG
GAGAACGAGT TCGTCACCGG GACGGTGATC ACGGTCGACG GGGGTTCGGT GCTGACCGGA
AGCTAG
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| Protein sequence | MALTGHRVVV IGGSSGMGLA TARAAALAGA SVTIASSDKG RLDAALADLP DGCAGVVADT
TDEDAVAALF QQVGRLDHLV YTAGDAVAPH PVAELPLAEA RRRLDVRFWG SVAAVKHAIP
YLSPTGSISV TSGTVGVRPV PGFALGAAGV GAIEGLARGL AVELAPIRVN VVRAGAIRTP
MWDRVPETQR ATMFAAMAKR TLTGTIGEAE QIAATHLYLM ENEFVTGTVI TVDGGSVLTG
S
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