| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4554 |
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| Symbol | |
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| ID | 8335908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5181835 |
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| End bp | 5183847 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957655 |
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| Product | ABC transporter related |
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| Protein accession | YP_003115257 |
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| Protein GI | 256393693 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA CGAACGCCGG CACGACCGCG GCGAACCCGG TGCTGGAGGT CAAGGGCCTG
AGCATCGACT TCCCGGTCCG CGGCGGCGGT GTCACGCACG CGGTCAAGGA CCTGGACTTC
ACGGTCCGCA CCGGCGCGGC GCTGGGCATC GTCGGCCAGT CCGGCTCGGG CAAGAGCGCC
ACCGCGCTGT CCCTGCTCGG CCTGCACCGC GGCACCTCGG CCCGGGTCTC CGGCCAGGTC
CTGGTCGACG GCGTGGACCT GGTCTCGGCG ACCGACACCG AGGTCCGCAA GCTGCGCGCC
TCCAAGATCG CCATGGTCTT CCAGGACCCG CTGACCGCCC TGGACCCCTT CCACACCATC
GGCGACCAGA TATCCGAGGT CTACCGCCTG CACACCAAGG CCTCCCGCAC CGAGGCCCGC
GCCCGCACGA TCGAGGTCCT GCAGCAGGTC CGCATCCCCG ACGCCGGACG CCGCTACCGC
GCGCACCCGC ACGAGTTCTC CGGCGGCATG CGCCAGCGCG CGCTGATCGC CATGGCCCTG
GCCTGCCGTC CGGCGGTGCT GGTCGCCGAC GAGCCGACGA CCGCGCTGGA CGTGACGGTC
CAGGCACAGA TCCTGGACCT GCTCGACGAG GTCCGCGCCG AGACCGGCAT GGCGCTGGTC
CTGATCAGCC ACGACCTCGG CGTGGTCGCC GGCACCGCCG ACGAGGTCGT GGTGATGCAC
GAGGGCGCGG CGGTGGAGAC CGGCTCGGCG GAGCAGGTGC TGCTGGATCC GCAGCATGCC
TATACGCAAG GGCTGCTGGC GGCGATGCCG CGGTTGGATT CGCCGCTGCC GGAGCGGGTT
CGGGTGTCGG GGGGCGGGGA CGCCGGTTCG GTGGCTGCCG GCTCGGTGGC TGCCGATTCG
GTGACGGCTG ATTCGGTGGC TGCCGGCTCG GTGGCTGCCG ATTCGTCGGC TGCCGATTCG
GTGACGGCTG ATTCGGTGGC TGCCGATTCG TCGGCTACCG ATTCGTTGGC TGCCAGCCTG
GTGGCTGCTG ATTCCTTGAC TGCCAGCCCG GTGGCCGCCG ACTCGGTGGC TGCCAGCTCG
TCGGCTGCCG ACTCGGTGGT TGCCAACCCG GTGGTTGCCA ATCCGGTGGC TGCCGATTCG
TCGGCTGCCG ACTCGCCGCG TCCAGATGAG GCGCTGGTCC GCATCGAAGA CGTCGCCAAG
CACTATCGCC GCGGCGGCGC CGTCTTCGGG CGCCGGACCG AGCCGCTTCG CGCGGTGGAC
GGCGTCAGCC TGGAGCTGCG CGCCGGCGAG ACCCTCGGCC TGGTCGGCGA GAGCGGCAGC
GGCAAGACCA CCCTGGCGCG CATGCTCGTG CGGCTGCTGG AGCCCTCGGC GGGGCGCGTG
GTCTTCAGCG GCACCGACAT CTCCGCCCTC GACGAGCGCC GGCTGCGGCC ACTGCGCCGC
GACCTGCAGA TGGTCTTCCA GGACCCGCTG TCCTCGCTCA ACCCGCGCCG CTCGGTCGGC
GAGACCATCG CCGATCCCCT GCGCATCGCC GGACAGTCCT CGGACTCTGA GATCCGCGCG
ACCGTCGCCG ACCTCATGAC CAAGGTCGGC CTGGACCCCG CGTCCTACGA CCGCTTCCCC
CACGAGTTCT CCGGCGGCAT GCGCCAACGC GTCGGCATAG CCCGCGCCCT AGCCCTGCGC
CCGAAACTCC TGGTCTGCGA CGAACCAGTG GCGTCCCTGG ACGTCTCCAC GCAAGCCGTG
ATCCTGGATC TCCTGCGCGA CGTCCAGCAG GAATACGGCC TCACCCTGGT CTTCGTCGCC
CACGACCTGG CCGTGGTCCG CCAAGTCGCC GACCGCGTAG CAGTGATGCG CTACGGCAAG
ATCGTCGAAC TCGCCGACGC CGCAACCCTG TTCCAGTCCC CCCAGCACGA GTACACCCGC
ACCCTCCTGA ACGCCGTCCC GATCGTCGAC CCGGCGGCAG CCCGAGCCCA GCGGCTGCGC
CGACGCGAGG CGCTGGCGGC AGCAGTGGTC TGA
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| Protein sequence | MTATNAGTTA ANPVLEVKGL SIDFPVRGGG VTHAVKDLDF TVRTGAALGI VGQSGSGKSA
TALSLLGLHR GTSARVSGQV LVDGVDLVSA TDTEVRKLRA SKIAMVFQDP LTALDPFHTI
GDQISEVYRL HTKASRTEAR ARTIEVLQQV RIPDAGRRYR AHPHEFSGGM RQRALIAMAL
ACRPAVLVAD EPTTALDVTV QAQILDLLDE VRAETGMALV LISHDLGVVA GTADEVVVMH
EGAAVETGSA EQVLLDPQHA YTQGLLAAMP RLDSPLPERV RVSGGGDAGS VAAGSVAADS
VTADSVAAGS VAADSSAADS VTADSVAADS SATDSLAASL VAADSLTASP VAADSVAASS
SAADSVVANP VVANPVAADS SAADSPRPDE ALVRIEDVAK HYRRGGAVFG RRTEPLRAVD
GVSLELRAGE TLGLVGESGS GKTTLARMLV RLLEPSAGRV VFSGTDISAL DERRLRPLRR
DLQMVFQDPL SSLNPRRSVG ETIADPLRIA GQSSDSEIRA TVADLMTKVG LDPASYDRFP
HEFSGGMRQR VGIARALALR PKLLVCDEPV ASLDVSTQAV ILDLLRDVQQ EYGLTLVFVA
HDLAVVRQVA DRVAVMRYGK IVELADAATL FQSPQHEYTR TLLNAVPIVD PAAARAQRLR
RREALAAAVV
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