| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4494 |
|---|
| Symbol | |
|---|
| ID | 8335848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 5121311 |
|---|
| End bp | 5122261 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644957596 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003115198 |
|---|
| Protein GI | 256393634 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00159832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC TGCTGGAAGC CGACGGCGTC GGCAAGTACT TCGGGAACGT GCGCGCGTTG
AGCGGCGTGT CGCTGTCGGT GCGTGCCGGG CAGGTGACGT GCGTGCTCGG CGACAACGGA
GCGGGCAAGT CCACGCTCAT CAAGATCCTG TCCGGGGTGT TCACTCCCGA CGAGGGCGAG
GTGCGCATCG ACGGCGCCGC CGTGAAGTTC CACAGCCCTC GCGACGCCCG CGCCGCCGGT
ATCGCCACGG TGTTCCAGGA CCTGGCGATG GTGCCGCTGA TGGCGATCTG GCGGAACTTC
TACCTCGGGT CGGAGCCGAC CAAGGGGTGG GGACCGTGGC GGCGTTTCGA CGCGCGTGCC
GCGCGAGCCA GCACGCGTGA GGCGTTGTCG GCGATGGGGA TCGATCTGCG CGACCCGGAC
CAGCCGGTCG GGACGCTCTC CGGCGGGGAG CGGCAGTCGG TGGCGATCGC GCGCGCCGTG
CACTTCGGTG CCAGGGTCCT GATTCTGGAC GAGCCGACCT CGGCGCTGGG GGTCAAGCAG
GCCGGGGTGG TGCTGCGGCG GGTCGTGCAG GCACGGGAGA GGGGTTTGGG CGTCGTTTTC
ATCACCCACA ACCCGCATCA CGCGCATCCT GTGGGGGACC GGTTCGTAGT GTTGAACCGT
GGCCGGTTGC TCGGGGACTT CGCCAAGAAC GAGATCAGCC GGGACGAGTT GGTGCGGCTG
ATGGCCGGCG GCGCGGAGTT GGAGACGCTC GGGCATGAGC TGGAGCGGAT TCCGGGGATC
GAGGTCGAAC CGGAACCGGA GCTGGAATCT GATCCGGAAC AGGAATCTGA ATCGAAACCT
GACATGCACG CGCAAGACTC ACAAGAGGAG TTGGATGGGC ACCGATCGCA CCAACCGCAC
GACCCGCAAG CCGGTCCGGC GCCGGCTGAA GCGCTCGATG AAGACGGCTG A
|
|---|
| Protein sequence | MTTLLEADGV GKYFGNVRAL SGVSLSVRAG QVTCVLGDNG AGKSTLIKIL SGVFTPDEGE
VRIDGAAVKF HSPRDARAAG IATVFQDLAM VPLMAIWRNF YLGSEPTKGW GPWRRFDARA
ARASTREALS AMGIDLRDPD QPVGTLSGGE RQSVAIARAV HFGARVLILD EPTSALGVKQ
AGVVLRRVVQ ARERGLGVVF ITHNPHHAHP VGDRFVVLNR GRLLGDFAKN EISRDELVRL
MAGGAELETL GHELERIPGI EVEPEPELES DPEQESESKP DMHAQDSQEE LDGHRSHQPH
DPQAGPAPAE ALDEDG
|
|---|
| |