Gene Caci_4490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4490 
Symbol 
ID8335844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5115954 
End bp5117177 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content71% 
IMG OID644957592 
Producthypothetical protein 
Protein accessionYP_003115194 
Protein GI256393630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.36205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCGG CGATCTCGTG GCTCGCCTCG GGCAGCGAGT TGGCGGCGGC GATCTCCTGG 
CTCGTGCTGG GCAGCGAGGT GGGTGGGGCG ACTTCGTGGC GCGTGCCGAG CAGCGAGGTG
GCCGTGGCGA TCTCGTGGCG CGACCCGGGC AGCGAGGTGG CGGCGGCGAT GTTGTTGTGT
GCGTCGAGCA TTTGGCTCGC TGCGACGCGT ATGCCGCACA AGCTGAGTGT TCTCGTCGTG
AGCTGCATGT CGCCCTCGCC AAAGCTGTGC CTCGGCCTGG ATGCCTTGTT GTGCCGCGTG
CTCCAACGAT CGTGGAGGTG GTTCATGGTT GAGGTCGGGG AGATTCGGCG GTTGCGGCGG
GTGCGGGTGG CGGAGCCGGA GGCTATTGCG GCGGCGGCTT CGGCGCGGCG GCGGCGGGGG
GCGCTGGTTG ATGGCGGGGG GCGGTTGATG CTTATTGCCG CTGATCATCC GGCGCGGGGG
GCGTTGGGGG TGCGGGATGA TCCGTTGGCG ATGGGGGATC GGCGGGAGTT GCTGGAGCGG
TTGGTGGTCG CGTTGGGGCG GCCGGGTGTT GATGGGGTGT TGGCGACCCC TGACATCGTG
GAGGACCTGC TGCTGCTTGG TGCGTTGGAG GACCGGGTCG TTGTCGGCTC GATGAACCGG
GGCGGGCTCG CCGGGTCGGT CTCCGAGCTC GATGACCGCT TCACCGCCTA CGATGCCGCT
GCCATAGCGT CCTCCGGCCT GGACGGCGGC AAGATGCTGC TCCGCATCGA CCTCCGCGAC
CCGGACACCG TCTCCACGCT GGAGGCGTGC GGCCGCGCCG TCTCCGAGCT GGCCGCGCGC
CGCCTGGTGG CGATGATCGA GCCCTTCATG GCCACGCGCG CCGGTGACGG CCGGTTGCGC
AACGATCTGT CGGTCGCCGC CGTCGTCCGC GCCTGCGCGA TAGCCGCAGG CCTGGGCTCG
ACCAGCGCCT ACACCTGGCT GAAGCTGCCG GTCGTGGAGG AGATGGAACG CGTCCTGGCC
GCCACCACGC TCCCGGTGCT GCTCCTTGGT GGCGACCCCG ACGTCGCGCC GGAGGAGACG
TACGCCGCCT GGGAGAAAGC CCTTGCCCTG GAAGGGGTTC ACGGCCTGGT CGTAGGTCGA
GCCCTGCTCT ACCCGCCGGA CGGCGACGTC GCCGCGGCCG TGGACACCGC CGCCGCGCTG
GTGAAACCGG GGGTGCGGGA ATGA
 
Protein sequence
MVAAISWLAS GSELAAAISW LVLGSEVGGA TSWRVPSSEV AVAISWRDPG SEVAAAMLLC 
ASSIWLAATR MPHKLSVLVV SCMSPSPKLC LGLDALLCRV LQRSWRWFMV EVGEIRRLRR
VRVAEPEAIA AAASARRRRG ALVDGGGRLM LIAADHPARG ALGVRDDPLA MGDRRELLER
LVVALGRPGV DGVLATPDIV EDLLLLGALE DRVVVGSMNR GGLAGSVSEL DDRFTAYDAA
AIASSGLDGG KMLLRIDLRD PDTVSTLEAC GRAVSELAAR RLVAMIEPFM ATRAGDGRLR
NDLSVAAVVR ACAIAAGLGS TSAYTWLKLP VVEEMERVLA ATTLPVLLLG GDPDVAPEET
YAAWEKALAL EGVHGLVVGR ALLYPPDGDV AAAVDTAAAL VKPGVRE