Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4446 |
Symbol | |
ID | 8335800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5058445 |
End bp | 5063895 |
Gene Length | 5451 bp |
Protein Length | 1816 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957548 |
Product | Carbamoyl-phosphate synthase L chain ATP- binding |
Protein accession | YP_003115150 |
Protein GI | 256393586 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTCA TCCACGCGGT CCGGGAGCTG AGCGCGCAAA GCGCGACGCC GATCGAGACC GTCGCCTTGC ACACCGACGT GGACCGCGAT GCCACCTTCG TCCGCGAGGC CGACATCGCC TTCGATCTCG GCCCGGCCGC CGCGCGTCCG TACCTGGATC TGAAGGTGCT GGAGCACGCC CTGCTGGAGT CCGGCGCGGA CGCGGCGTGG GTCGGCTGGG GTTTCGTGGC CGAGGATCCG GCGTTCGCAG AGCTTTGCGA CCGGATCGGC GTGACGTTCA TCGGTCCCGA TGCCGAGGCG ATGCGCCAGC TCGGCGACAA GATCGGCGCG AAGCTGATCG CCGAGGAGGT CGGCGTCCCG GTGGCTCCGT GGAGCCGCGG CGCCGTGGAG ACGCTGGAGA CGGCGATCGA GGCGGCCGGG CAGATCGGCT ATCCGCTGAT GCTCAAGGCG ACCGCCGGCG GCGGCGGACG CGGCATCCGC GTGATCACGA ACGAATCCGA ACTCGTCGAC GCCTACGAGC GCACCAGCCA GGAAGCGGCG CGCGCCTTCG GCTCCGGCAT CGTGTTCCTG GAGCGTCTGG TCACCGGCGC TCGGCACGTC GAGGTGCAGG TCATCGCCGA CGGTCAGGGC ACGGCGTGGG CGCTCGGCGT CCGCGACTGC TCGATTCAGC GCCGCAATCA GAAGGTGATC GAGGAGTCGG CGTCGCCGGT GCTCAGCGCT GAGCAGGCTG CTGAGCTGAA GTCATCGGCT GAGCGTCTCG CGGTGCGGGT CGGTTACCGA GGCGCGGCGA CCGTCGAATT CCTCTACCAC CCTGGTGACA AGCAGTTCGC GTTCCTGGAG GTCAACACCC GGCTTCAGGT CGAGCACCCG ATCACCGAGC TGACGACCGG GTTCGACCTG GTCAAGGCGC AGCTGCACGT CGCGGGCGGC GGGAAGCTGG AGGGTCGTCC CCCGGCTGAG CGCGGGCACG CGATCGAAGC TCGGCTCAAC GCTGAGGACC CGGACCGCGA CTTCGCGCCC TCGCCGGGGC GCATCGCACG CCTCGACTTG CCTGCCGGTC CCGGTATTCG CGTCGACACT GGCGTGTCGG AGGGTGACAC CATCCCCGCC GACTTCGACT CGATGATCGC CAAGGTGATC GCCTACGGCC GTGACCGCGA CGAGGCCCTG GGCCGGTTGC GGCGCGCGAT GGCGGAAACC TCGGTGGTGA TCGAAGGCGG AACCACCAAC AAGAGCTTCG TTTTGGACCT GCTGGACCAG CCCGAGGTGA TCGACGCGAG TGCCGACACC GGCTGGATCG ACCGGGTCCG CGCCGAAGGC CGCCTGGTCT CCCACCGCAA CGCCGCAGTC GCCTTGGCCG CCGCCGCCAT CGACGCCTAC GAAGACGAGG AACGGGTCGA GCGTGCCCGG CTGCTGTCTA CCGCATCCGG CGGACGCCCC CAAGTCCAGC ACGAGTCCGG CCGACCGCTG GACCTGAAAC TGCGCGGCGT CAGCTACAAA GTCCGGGTCG CGCGCGTGGG TGCGCACCGG TTCCGCGTGG GGATAGAGGC AGGCGACGGG CACGGCGCGC AGTCCCAGAC CGCCGACGTC GTCCTGGACC GTTTCGACCG GCACACCGGT CAGATCGCGG TCAACGGCTC ACGTTTCCGG CTCCTGACCG CCACCCACGG CTCGGTGCAC CAGGTCGAGG TGGACGGCGT CACCCACCGC GTGTCCCTTG ACGAGGGCGG TGTGATCCGT TCTCCTGCCC CGGCGCTGGT GATCGCCACC CCGTTGCAGG TCGGCGCCGA AGTCGAAGCC GGCGCGCCGG TGGTGGTGCT GGAAAGCATG AAGATGGAAA CGGTGCTGCG CGCACCGTTC AAAGCCCGCC TGAAAGAACT CGCCGTCACC GTCGGCAGCC AGGTCGAAAC CGGCGCCCCT CTGCTCCGCC TGGAGCAGAT CGTCGAGGAG GACGCCGACG AAGCCGCCGC CTCCGCCTCC GCGCAGCCGA CCGAGGCCGC CGAGCTGGAC CTGCCCGCCG CTCCCGCCGA GGTTCCCGTC CGCGCCCGCG TGGCGCAGGG CCAGGAGGAC CTTCGCAGTC TGCTGCTCGG CTTCGACGTG GACCCGCACG ACGAGGACCG CATCCTCGCC GGCTACGTCG AGGCCCGCAC CACCGCCGTC GAGCAGGGCT TGCGTCCGCT GTCCGGCGAG CTGAGCCTGA TCGAGGTCTT CGCCGACCTC GCGGACCTCG GCCGCAACCG TCCCGCGGCT GCCGCCGAGG AGAGCAACGG CGAGAGCCAG CTGCACAGCG CGCACGAGTA CTTCCACACC TACCTGCAGA GCCTGGACGT GGAGCGCGCC GGGCTGCCGG AGTCCTTCCA GGCCGCGCTG CGCAAGGTGC TGGCGCACTA CGGCGTCACC GAGCTGGACC GTTCGCCGGA GCTGGAAGCG GCGGTGTTCC GCATCTTCCT GGCGCGTCAG CGTTCTGCGA CGGACGCCAC CGTGATCGCC GCGCTGATGC GGGCCTGGCT GCGCGAGCTG CCGCCGGACG AGCTGCTGCG CGAGCCCACC GGCCTGGCGC TGGAGCGGCT GATCGCGGCC ACGCAGGTGC GCTTCCCGAA CGTCGCGGAC CTGGCGCGCG GCGTGGTCTA CGCGTGGTTC GGCCAGCCGC TGCTGCGCCG CAACCGGGCC CGCGTCTACG CCGCCATCCG TAAGAACCTG CGATACCTGG ACGAGAACCC GCGGGCCGAG GACCGCGACG AGCGCGTCGC CGAGATGGTC CGCAGCACCG AGCCGCTGGT CCGGCTGCTG GCCCAGCGCC TGGTGCACAC CGAGCTGGAC AACTCGGCGA TGCTGGAGGT CCTGACCCGG CGCTACTACG GCAACAAGGG TCTGACCGGC GTGCGGACCA CCGAGGTCGG CGGCAACCCG TTCATCGTCG CCGAGCACGA CGGCTCGCAG CTGGCGTCGG CGGCCGTGCC GTTCGACCGG CTCGGGGACG CCCTGGACGG CCTGGCCGAG CTGGCCGCCT CCGCCGGCGC CCTGGACGCC GACATCTACC TGCTCTGGGA GAACCAGCCG GACACCGACG AGGCGGCGAC CGCGTTGCAG CGCGTGATCA GCGCGCATCC GCTGCCGCAG CAGGTGCGCC GGGTGACCGC GACGGTCGCC GGGCGCCGCA ACTCGGTGAT GCACCACCAC TTCACCTTCC GGCGTTCCAC CACCGGGTTG ACCGAGGAGC GGCTGATCCG CGGCCTGCAC CCGTTCATCG CCGAGCGGAT GCAGCTGGAG CGGCTGAACA AGTTCGACCT GACGCGCCTG CCGTCCTCGG ACGAGGACGT GTACCTGTAT CAGTGCGTGG CGCGGGAGAA CCCGGCCGAC GACCGGCTGG TCGCCTTCAC CCAGGTACGC GACCTGACCG AGCTGCGCGA GCACGACGGC CGCCTGGTCG CGCTGCCCAC CGCCGAGGAC GCGATCGCGG CGTGCGTGGA CTCCATCCGC CGCGCGCAGC TGCGCAAGCC CTCGAACAAG CGGTTCAGCA CCAACCGGGT CGTGGTCTAC CTGTGGCCGG TGTCGGACAT CAAGCGCTCG GAGCTGTATC TGATCGCCCA GCGCATCCTG CCCTCCACGG TCGGCGCGGG GCTGGAGGAG ATCGAGCTCA TCGGGCGGCA GCGCTCGTGG AAGACCGGCG AGCTGATCAA GATCGCGGTC CGGGTCCGCT TCGACACCGC GGGCAACCCC TCGCTCAACG TCGGCGAACC CACCCTGAGC CCGATCGAGC CGCTGGACGA CTACCGGCTG AAGGTCATGC GCGCCGCCAG CCGCGGGACG GTGTACCCCT ACGAGCTGGT CGACTCCCTC GGCGACTTCA CCGAGCACGA CCTCGACGAG GCGCACACCC TGGTCCCGGT CGACCGGCCC AAGGGGCGCA ACAGCGCGGC GATGGTGGCC GGCGTCATCA GCACGAAGAC CCGGCGGCAC CGTCAGGGGG TGACGCGGGT GCTGCTGTTG GGCGACCCCA CGAAGTCTCT GGGCGCGCTG TCTGAGCCTG AGTGCCGCCG GGTGATCGCC GCGCTGGACC TTGCTGAGCA GATGAAGGTT CCTGTCGAGT GGTACGCCTT GTCCTCCGGC GCTCGCATCT CGATGCAGTC CGGTACGGAG AACATGGACT GGGTGGCTGC TGCGCTGAAG CGGATTGTGG AGTTCACGCA GGATGGCGGC GAGATCAACG TTGTCGTCAA CGGCATCAAC GTTGGTGCGC AGCCCTATTG GAACGCCGAA GCCACGATGC TGATGCACAC GCGTGGTGTT CTGGTCATGA CTCCGGACTC TGCGATGGTG TTGACCGGTA AGCAGGCGCT GGACTTCTCC GGCGGTGTCT CGGCCGAGGA CAACTTCGGC ATCGGCGGCT ACGACCGGGT CATGGGCCCG AACGGGCAGG CCCAGTACTG GGCGCCTAGC CTGGCTGCCG CTCGCGACGT GCTCATGTCT CACTACGACC ACACCTACAT CGCGCCGGGC GAGACCTCGC CGCGGCGCGC TGGTACCGAC GACCCGTACG ACCGCGATGT GTCGAGCTTC CCGCACACGT TCGCCGGTTC GGACTTCACG ACCGTCGGCG AGATCTTCAG CGCTGCCGCG AACCCCGACC GCAAGAAGGC GTTCGACATC AGGACCGTGA TGCGGGCGCT GTCGGACCAG GACCACCCGG TGCTGGAGCG CTGGGCCGGG ATGGCGGGCG CCGAGACGTC GGTGGTGCAG GACGTGCATC TCGGCGGGCT GCCGGTCTGC CTGGTCGGTA TCGAGTCGCG AGCCGTTCCG CGCCGTGGGT TCCCGCCCAC CGACGGTCCG GACACGTACA CCGCCGGCAC GCTGTTCCCG CAGTCGTCTA AGAAGGTCGC GCGCGCGATC AACTCCGCTT CGGGGAACCG TCCGCTGGTG GTGCTGGCGA ACCTCTCCGG CTTCGACGGC TCGCCGGAAT CCATGCGCAA GCTCCAGCTG GAGTACGGCG CCGAGATCGG ACGCGCCATC GTCAACTTCG AGGGCCCGAT CGTCTTCTGC GTGATCTCCC GCTACCACGG CGGCGCCTTC GTGGTCTTCT CCAAGGCACT GAACCCGAAC ATGACGGTCC TGGCCCTGGA AGGCTCCTAC GCCTCAGTCC TCGGCGGCGC CCCAGCCGCA GCAGTGGTCT TCTCCGGCGA CGTGAACTCC CGCACCGCCA ACGACCCCCG CATCCGCGAC CTGGAATCCC GCGTCACCGC CGCCTCCGGC ACCGACCGAG CCGCCCTGGC CGCCGAACTC GACGAACTCC GAGCCTCCGT CCGAGCCGAA AAACTCGGCG AGGTAGCCAC CGAATTCGAC CGCGTCCACA GCATCCAACG AGCCGTCCAA GTAGGCTCCG TCGACGAAGT CATCAAGGCC GCCGACCTCC GCCCCAAGAT CATCGCCTCC ATCGAGGCAC GCCTCGGTTA G
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Protein sequence | MRLIHAVREL SAQSATPIET VALHTDVDRD ATFVREADIA FDLGPAAARP YLDLKVLEHA LLESGADAAW VGWGFVAEDP AFAELCDRIG VTFIGPDAEA MRQLGDKIGA KLIAEEVGVP VAPWSRGAVE TLETAIEAAG QIGYPLMLKA TAGGGGRGIR VITNESELVD AYERTSQEAA RAFGSGIVFL ERLVTGARHV EVQVIADGQG TAWALGVRDC SIQRRNQKVI EESASPVLSA EQAAELKSSA ERLAVRVGYR GAATVEFLYH PGDKQFAFLE VNTRLQVEHP ITELTTGFDL VKAQLHVAGG GKLEGRPPAE RGHAIEARLN AEDPDRDFAP SPGRIARLDL PAGPGIRVDT GVSEGDTIPA DFDSMIAKVI AYGRDRDEAL GRLRRAMAET SVVIEGGTTN KSFVLDLLDQ PEVIDASADT GWIDRVRAEG RLVSHRNAAV ALAAAAIDAY EDEERVERAR LLSTASGGRP QVQHESGRPL DLKLRGVSYK VRVARVGAHR FRVGIEAGDG HGAQSQTADV VLDRFDRHTG QIAVNGSRFR LLTATHGSVH QVEVDGVTHR VSLDEGGVIR SPAPALVIAT PLQVGAEVEA GAPVVVLESM KMETVLRAPF KARLKELAVT VGSQVETGAP LLRLEQIVEE DADEAAASAS AQPTEAAELD LPAAPAEVPV RARVAQGQED LRSLLLGFDV DPHDEDRILA GYVEARTTAV EQGLRPLSGE LSLIEVFADL ADLGRNRPAA AAEESNGESQ LHSAHEYFHT YLQSLDVERA GLPESFQAAL RKVLAHYGVT ELDRSPELEA AVFRIFLARQ RSATDATVIA ALMRAWLREL PPDELLREPT GLALERLIAA TQVRFPNVAD LARGVVYAWF GQPLLRRNRA RVYAAIRKNL RYLDENPRAE DRDERVAEMV RSTEPLVRLL AQRLVHTELD NSAMLEVLTR RYYGNKGLTG VRTTEVGGNP FIVAEHDGSQ LASAAVPFDR LGDALDGLAE LAASAGALDA DIYLLWENQP DTDEAATALQ RVISAHPLPQ QVRRVTATVA GRRNSVMHHH FTFRRSTTGL TEERLIRGLH PFIAERMQLE RLNKFDLTRL PSSDEDVYLY QCVARENPAD DRLVAFTQVR DLTELREHDG RLVALPTAED AIAACVDSIR RAQLRKPSNK RFSTNRVVVY LWPVSDIKRS ELYLIAQRIL PSTVGAGLEE IELIGRQRSW KTGELIKIAV RVRFDTAGNP SLNVGEPTLS PIEPLDDYRL KVMRAASRGT VYPYELVDSL GDFTEHDLDE AHTLVPVDRP KGRNSAAMVA GVISTKTRRH RQGVTRVLLL GDPTKSLGAL SEPECRRVIA ALDLAEQMKV PVEWYALSSG ARISMQSGTE NMDWVAAALK RIVEFTQDGG EINVVVNGIN VGAQPYWNAE ATMLMHTRGV LVMTPDSAMV LTGKQALDFS GGVSAEDNFG IGGYDRVMGP NGQAQYWAPS LAAARDVLMS HYDHTYIAPG ETSPRRAGTD DPYDRDVSSF PHTFAGSDFT TVGEIFSAAA NPDRKKAFDI RTVMRALSDQ DHPVLERWAG MAGAETSVVQ DVHLGGLPVC LVGIESRAVP RRGFPPTDGP DTYTAGTLFP QSSKKVARAI NSASGNRPLV VLANLSGFDG SPESMRKLQL EYGAEIGRAI VNFEGPIVFC VISRYHGGAF VVFSKALNPN MTVLALEGSY ASVLGGAPAA AVVFSGDVNS RTANDPRIRD LESRVTAASG TDRAALAAEL DELRASVRAE KLGEVATEFD RVHSIQRAVQ VGSVDEVIKA ADLRPKIIAS IEARLG
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