Gene Caci_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4388 
Symbol 
ID8335742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4981337 
End bp4981774 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content64% 
IMG OID644957491 
Producthypothetical protein 
Protein accessionYP_003115093 
Protein GI256393529 
COG category 
COG ID 
TIGRFAM ID[TIGR02241] conserved hypothetical phage tail region protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.345836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CCGCTCAGGA TCCGGGTTCG AGCCTGTTTT TCAAGCTGAC CATTGATGGT 
CAGGATCTTG GTTTGTTCAA CCAGTGCGAG GGCTTGTCCG CCGAGGTGGA GGTCTATCAG
CACAAGGAGG GTGGGAACAA TGGGTACACC ACCTTTCTGC CGGGGCGGGT CAGTCATGGG
AACATCACGA TGACGCGGCC GTTGACGCCG GACAGCGGCA AGATCGCGGC GTGGATCTCC
TCGATCGCCA CGGGGATTCA GCGGCCGACG GCGCAGATCG CTGCTTTGCG GGCGGACGGG
ACGCTGGTGG TGCAGTGGGG GTTGCTGGAC GTGCTGCCGG TCAGCTGGAG CGGGCCGACG
CTGGATCCGA CCAGCAACAC CGTGGCCACC GAGCGGTTGG TCATCGCCCA CCACGGCTTC
ACCGAATCGG GAGCGTGA
 
Protein sequence
MTTAAQDPGS SLFFKLTIDG QDLGLFNQCE GLSAEVEVYQ HKEGGNNGYT TFLPGRVSHG 
NITMTRPLTP DSGKIAAWIS SIATGIQRPT AQIAALRADG TLVVQWGLLD VLPVSWSGPT
LDPTSNTVAT ERLVIAHHGF TESGA