Gene Caci_4314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4314 
Symbol 
ID8335668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4896550 
End bp4898034 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content65% 
IMG OID644957417 
Producthypothetical protein 
Protein accessionYP_003115019 
Protein GI256393455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00459164 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGCCCA AGGGTTTCGA CTCCGCCGAA TCGCACGACC AAGCGAACGT GCTCCCGGAT 
GCGCTCACCA TTCTGACCCG GACAAGCTGG GGCGACCTTG AGCATGCGCA AGGGTCCGCT
GGCGACATCC CGGCAGGGCT TAGGCGTTTC TTAGACGACG GCATTACAGC CAGGACGCAC
GCGGTCGCGA AATATTTGGA GGTCGTGAAC CACCAGAACA GCATCTACTC GGCCACGACG
TCCGTAGCGC TCTACGTCGC GGCGCACTTG GCCGATCAGC GAACCGCCGC GTTAGAGATC
ATCTGCCAGG ATGGGCAGCT TCGACCTCTC CGAGCCGTGC TGATCGACTG GCTGGGTCTT
ATTGCGGACG ATGTCAGCGA CGAAATGCTG GCGGTCGGAC TCGGCCATGG CTTCCAGGAA
CTCCCGGCGG AGATGCGTCT TCGCTCAGCT CGTTCTGCCA TATTCCAAGT CGTCGTCTCT
TACGTCAACG ACCCACTAGT GATCGTCCGA ACCGCCGCAG TCACCTCCGC GCTCCTGCTG
CTCGACACGC CCGAAGAACG TCGACGGCAT CAAGCCCGGT TGGCGCCGGG CGTGCATGGG
GTGCTGGAAC AGAGCGACGA CAGGTACCAC CGCGCCTGTG CACTGGACAG CCTCGACATC
TGGGGCGTGG ACACCCGGCA GCTGCGGGCG GACGAGCCGT CGAGGCCGTA TTCGCCTCGG
CTTCCGCGGG CTTGGGCCAC TTATGGTGGT GATGTGGACG ACCTACCGCT CTGGCTTGTG
TTCCGCACTG CCGTCGCCGA TCGTTTCCAG ACCGTACCCC GCGGGCCGCA GGCAGCTTCC
CTCTTTACGG ACCGTATGCA TCTCGGCCGG GACGATCGCG GATTCTGGCG CGACTTCTCC
AACGACATCC TTCATCAGGA CACGTGCGGA CCTCATACCG CTGACGGCGT CCCGTTGCTC
GCGGCGATCG CCGCCGCCGA CCGGGTGCCG CCCCGCCACC GCTTCGATGC TGTCGAGCTC
TTGGTCGACA TCGCAACGGT GACTGAGCGG CACGAGGCCG AATGCTGGCC GGACCCGCCA
CCGCACGCCG ATTTCCTTAG CGAGCCAGAA GCGCGGGTCG CGGTTCACGC TCACGTCCCG
GAACTGCTCG CGCGCTGGGG TTCTGAGTGC CCAGCGGTCC AGATGGCGCT GGCCGCGCTG
GCCGTGACCT TCCGTACCGA GCGAACGTAT CCCGCGCTGG CAGCACGCCT TCAACGATCC
GTGGATCAGT ACCCTGCGGG CACCGACATC GGCGACTACG TGCGGCTCAT CCTTGTTCTG
GCGTCCGGCG ACGACCGCGA AACACTTGAT GCGGTCGAGA GTTTCACCGA TGCCTACTGG
AGAGGCACAC CACGCGAGGC GCCGCTACGC GGCCGGGCAC TCCATCTGCT CAGACAGATG
CTGGTGAAGG CCAAACCAAG CGTGCCGATG ACCACCGCCT CATAA
 
Protein sequence
MTPKGFDSAE SHDQANVLPD ALTILTRTSW GDLEHAQGSA GDIPAGLRRF LDDGITARTH 
AVAKYLEVVN HQNSIYSATT SVALYVAAHL ADQRTAALEI ICQDGQLRPL RAVLIDWLGL
IADDVSDEML AVGLGHGFQE LPAEMRLRSA RSAIFQVVVS YVNDPLVIVR TAAVTSALLL
LDTPEERRRH QARLAPGVHG VLEQSDDRYH RACALDSLDI WGVDTRQLRA DEPSRPYSPR
LPRAWATYGG DVDDLPLWLV FRTAVADRFQ TVPRGPQAAS LFTDRMHLGR DDRGFWRDFS
NDILHQDTCG PHTADGVPLL AAIAAADRVP PRHRFDAVEL LVDIATVTER HEAECWPDPP
PHADFLSEPE ARVAVHAHVP ELLARWGSEC PAVQMALAAL AVTFRTERTY PALAARLQRS
VDQYPAGTDI GDYVRLILVL ASGDDRETLD AVESFTDAYW RGTPREAPLR GRALHLLRQM
LVKAKPSVPM TTAS