| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4297 |
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| Symbol | |
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| ID | 8335651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4875557 |
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| End bp | 4876618 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957400 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_003115002 |
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| Protein GI | 256393438 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000180062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCTTACT CGCCAACTTC CTCCCTTTTA TCCCGTCGCG GCATCCTGGC CGCAGTCGGC
GGCGGCGCCG TCGCCACCGC CCTCGCAGCC TGCGGGAGCG GCGGCAGCGG CAGCGGTTCG
AGCCCTGCGT CGGGCTCGGG ATCCGCGGCG AAAACCGGCT CCGCCGGGCC CTGGTCCTTC
ACCGACGACC GGAAGCAGGT GGTGAAAGCC GCCTCCGCCC CCACCCGCGT CGTCGCCTTC
ACCGGCACCG CCGCCGCGCT CGTCGACTTC GGGCTCGACC GGCAGATCGT CGGCGTCTTC
GGGGAGACGA CGCAGCCCGA CGGCAAGGCG ACCGCGCAGG CCGGGGACCT CGACGTCGGC
AAGGTGAGCG TGCTGGGCAA CGCCTGGGGC GAGTTCAACG TCGAGAAGTA CGCCGCACTC
AACCCGCAGC TGCTCGTCAC GCACATGTAC GAGCCCGGCG CGCTCTGGTA CGTCCCGGAC
GAGAGCAAGG ACCAGATCGC CAAGCTCGCC CCGAGCGTGG CGATCAACGT GGCGCGGGTC
TCGCTGCCCA CGCCGATCCA GCGCTACGCC GACCTGGCGC AGTCCCTCGG CGCGGATCTG
AGCGCCAAAA AGGTCACCGA CGCCAAGACC CGCTTCGAGA CCGCCGCCGA AACACTGCGC
ACCGCGGCGA AGGCAGCCGG CGGGCTGAAG GTCCTGGCAG CCTCGGGCAG CCCCAACACG
TTCTACGCCT CCAACCCGAA GATCGCCGCC GACCTGATGT ACTTCGCCGA ACTCGGCGTG
GACCTCATCG TCCCGGACAA GCTCGACACC GGCGACTACT TCGAAAGCCT GAGCTGGGAG
AACGCCGACA AGTACGCGGC GGACCTGATC CTGCTCGACA GCCGCTCCAC CGCCCTGCAG
CCCGCCGCGC TGACCTCCAA GCCGACCTGG AACGCGCTGC CGGCGGTGAA GGCCGGCCAG
GTCACGCCCT GGGACGCGGT CCCGCGCTTC TCCTACGCCG GCGCCGCTCC CCTGCTGGAA
ACCCTCGCCA AGGCCATTCA GAATGCGAAG AAGGTGAGCT GA
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| Protein sequence | MPYSPTSSLL SRRGILAAVG GGAVATALAA CGSGGSGSGS SPASGSGSAA KTGSAGPWSF
TDDRKQVVKA ASAPTRVVAF TGTAAALVDF GLDRQIVGVF GETTQPDGKA TAQAGDLDVG
KVSVLGNAWG EFNVEKYAAL NPQLLVTHMY EPGALWYVPD ESKDQIAKLA PSVAINVARV
SLPTPIQRYA DLAQSLGADL SAKKVTDAKT RFETAAETLR TAAKAAGGLK VLAASGSPNT
FYASNPKIAA DLMYFAELGV DLIVPDKLDT GDYFESLSWE NADKYAADLI LLDSRSTALQ
PAALTSKPTW NALPAVKAGQ VTPWDAVPRF SYAGAAPLLE TLAKAIQNAK KVS
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