| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4226 |
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| Symbol | |
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| ID | 8335580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4793357 |
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| End bp | 4794589 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957329 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003114931 |
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| Protein GI | 256393367 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.094038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG AACCGGCGAG CGAAGTCATC GCCGCCCTCT ACGCCGACAG CTGGAGCCGG
ATCGTGGCGA CCATGATCCG CTTCACCGGC GGCGACTGGA ACCTGGCCGA GGAGTGCGCA
CAAGACGCCT TCACCCAAGC CCTGCGCCGC TGGCCCGACG AAGGCATCCC CCGCCAACCG
CTCGCCTGGC TGACCACCGC CGCCCGCAAC CGCGCCATCG ACACCTTCCG GCGCGCCTCC
ACCGAGGCGG CGAAGCTGCG CCAGTGGGCA GCCCTGGAAG CCAAGGCGCC GCCGCCCTAC
ACCCGCGACA GCGAAATCCC GGACGAGCGC CTGGAGCTCA TGTTCACCTG CTGCCACCCG
GCACTGAACC TCGACGCGCA AGTAGCGCTG ACCTTGCGCT CACTCGCGGG CTTGAGCACC
GCCGACATCG CACGCGCCTT CCTGGTCAGC GAACGCACCA TGGCCCAGCG CATCTTCCGC
GCCAAGCAGA AGGTGGCGCA CGCCGTCATC CCGTTCCGCG TCCCGCCGGC CCACCTGCTG
CCCGATCGCC TGCCCGCAGT CCTGCACGTG CTGTATCTGC TCTACAACGA GAGCTACAGC
GACCAGCAGC ACAAGGCGCG CCTGAGCACG GAGGCGATCC GACTGGCGCG AGTCCTGGCC
ACGCTGATGC CGGACGAGCC CGAGGCACAG GGCTTGCTGG CCCTGATGCT GCTGCAGGAG
GCGCGCCTCG CGACACGTCT GGACGCCGAA GGCGAACTGG TCACGCTGGA ACACCAGGAC
CGCTCCCTAT GGGACCGCAA GCGCATCGAC GAAGCCACGG CAATCTTGGA GAGCGCCCTA
CGCCGCCGCC GAGCCGGACC CTTCCAGATC CAGGCAGCCA TCGCCGCCTG CCACGCAACC
GCAGCCTCCG TCGAGAAGAC CGACTGGCCG CAAATCGTCG GCCTCTACGA CCAACTCCGC
CGCGTCTCGC CAAGCCCCCT GGTCGACCTG AACCGCACCG TCGCCCTAGC AATGGCACAG
GGCCCTGAGA CCGCCCTGCC CGACCTCGAC ACCCTCACCG CCTCCGGACG CCTCGACGGC
TACCACCTCC TGCACGCGGC CCGCGCCGAC CTGCTCGCCA AGGTAGGACG CGACGCGGAA
GCGAGGGCAA GCCTGGAAAC CGCGTTGGAG CTGGCACCGA CCGACGCCGA GCGGCGGCTG
TTGCAGCAGC GGTTGCATCC CGGGCGTACG TAA
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| Protein sequence | MTDEPASEVI AALYADSWSR IVATMIRFTG GDWNLAEECA QDAFTQALRR WPDEGIPRQP
LAWLTTAARN RAIDTFRRAS TEAAKLRQWA ALEAKAPPPY TRDSEIPDER LELMFTCCHP
ALNLDAQVAL TLRSLAGLST ADIARAFLVS ERTMAQRIFR AKQKVAHAVI PFRVPPAHLL
PDRLPAVLHV LYLLYNESYS DQQHKARLST EAIRLARVLA TLMPDEPEAQ GLLALMLLQE
ARLATRLDAE GELVTLEHQD RSLWDRKRID EATAILESAL RRRRAGPFQI QAAIAACHAT
AASVEKTDWP QIVGLYDQLR RVSPSPLVDL NRTVALAMAQ GPETALPDLD TLTASGRLDG
YHLLHAARAD LLAKVGRDAE ARASLETALE LAPTDAERRL LQQRLHPGRT
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