| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4221 |
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| Symbol | |
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| ID | 8335575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4786370 |
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| End bp | 4787245 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957324 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003114926 |
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| Protein GI | 256393362 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.174626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.39813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCT CGACCGCAGC GGTGGCCGAC GCCGTGGACA CCGCCGCCGC GGGCCGCCGC
CGTCTGGCGC TGCGCCCCGG TACGTGGGTC ACCTGGGGAG TGCTGACGTT CTTCCTGCTG
AACCTCACCG GGGTGATCGC CACGGTGCTG CTGAACTCCT TCGGCAGCCG GTGGTTCGAC
TCCTGGCTGC CCGGCGGCTG GACCAGCCAC TGGTACTCCG ACGCGTGGAA GGAGTTCAGC
CTCGGGCGGG TCCTGGGCGT CACGCTGGAG GTGACGCTGC TGGTCGTCGC GATCTCGCTG
ATCCTCGGCG TGCCGGCCGC CTACGCACTG GCGCGGCGGG ACTTCCCCGG CAAAAGGGCG
CTGAACCTGC TGTTCGTGCT GCCGATCCTG GTACCGCCGA TCGCCTACGG CATCCCGCTG
GCGACCATGC TCTACAAGGT CCACCTGGCC GGGACGCTGA CCGGCGTGGT GCTGGCGAAC
CTGGTGCCCT CGATCCCGTT CGTGGTGTTC ACCATGACGC CGTTCATCGA GCAGATCGAT
CCCCGGATCG AGGCGGCGGC GCGCGTGTGC GGCGCGAAAA CGCCGACCGT GCTGGGACGG
ATCCTGGCGC CGCTGCTGCT GCCGGGGATG CTGGCCGCCG GGATCTTGGT GCTGGTGCGC
ACGTTCGGCA TGTTCGAGTT GACCTTCCTC ACCTCCGGGC CGACCAGCCA GACGCTGGTG
GTGACCCTGT TCTCGGCCGT GAACTCCGCC GGCATCCGCT CGACGCAGTC GATCGACGCC
ATGGCCGTCG TCTACACCGG CTCGATGGCG GTGCTGCTGC TGATCGCGCT GCGCTTCGTG
AATCCGACCC AGCTGGTCGC GCGGTCCGCG GACTGA
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| Protein sequence | MSASTAAVAD AVDTAAAGRR RLALRPGTWV TWGVLTFFLL NLTGVIATVL LNSFGSRWFD
SWLPGGWTSH WYSDAWKEFS LGRVLGVTLE VTLLVVAISL ILGVPAAYAL ARRDFPGKRA
LNLLFVLPIL VPPIAYGIPL ATMLYKVHLA GTLTGVVLAN LVPSIPFVVF TMTPFIEQID
PRIEAAARVC GAKTPTVLGR ILAPLLLPGM LAAGILVLVR TFGMFELTFL TSGPTSQTLV
VTLFSAVNSA GIRSTQSIDA MAVVYTGSMA VLLLIALRFV NPTQLVARSA D
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