| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4127 |
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| Symbol | |
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| ID | 8335481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4667296 |
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| End bp | 4668753 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957230 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003114832 |
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| Protein GI | 256393268 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.773525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGAC GCCCGGCGGA GACTTCGCGT CCCCACTACA ACGTCATCTT CGCGGTCCTG
CTCATCGGCA TCTCCGCCTA CGCGGTCCTG CAGTCGCTCG TCGCCCCGGT CCTGGCGACC
TTCATCACCG CCCTGCACAC GACGCAGGAC ACGGCGACGT GGCTGATGAC GGCCTACCTG
CTGTCCGCCT CGGTCGCCAC CCCGATCCTC GGCCGCATCG GCGACAAGGT CGGCAAGGAG
CGGATGCTGG TCCTCACGCT GCTCGCGCTG ACCCTCGGCT CGGGGCTGGC GGCGCTGTCG
CACTCCGTCG CCCTGATGAT CATCGCGCGC GCGATCCAGG GCCTCGGCGG CGGACTGCTG
CCGCTGTCCT TCGGCATCAT CCGCGACGAG TTCCCGCCGG AGAAGGTGAA CTCCGCGATC
GGTCTCGGCT CGGCGACGGT CGCCGTCGGC GGCGGTCTCG GACTGCTGAT CGCGGGCCCG
ATCGTCACGC ACCTGAACTA CCACTGGCTG TTCTGGATAC CGATGGTGCT GACCGCGATC
GCCACCGTCG CTTGCTGGCG CTTCGTGCCG GAATCCCCGG TGCGCACGCC CGGGAAGATC
AGCTGGGGCG CGGCGGTCCT GCTCTCGGCC TGGCTCGTGA TGCTGCTGCT GGCCGTCAGC
GAGGGCCCGA CCTGGGGCTG GGGCTCGACG AAGGTGATCG GGCTGTTCCT CGGCGCGGTG
GTCTGCCTGC CGCTGTGGAT CCTCACCGAG CTGAAGTCGA GCGCGCCGCT GATCGACATG
CGGATGATGC GCCTGCCGGC GGTGTGGACG ACCAACGTCG TGGCGCTGCT GTTCGGCGTC
GGGATGTACA CGGTGATGAC GTTCCTGCCG CAGCTCGTGC AGACCCCCCG CGCCACGGCC
GGCTACGGGC TCAGCGCCAG CATCACGCAG TCCGGCGTCT ACCTGCTGCC CATGACGATC
GGCATGTTCC TGCTCGGCAT CGCCGCCGCG CCGCTGGCCA AGCGCATCGG GCTGAAGGCC
GTGCTGGTCC TCGGCTGCGC GGTCAGCATC CCCGGCTTCG CCGCCCTCGC CTTCGGGCAT
TCGCAGGGCT GGGAGATCTA CCTGGCGTGC GGACTGCTCG GCATCGGCAT CGGCCTGGCG
TTCGCCTCGA TGTCCGCGAT CGTGGTCCAG TCGGTCCCGG CCGCGCAGGT CGGCGTCGCC
AGCGGCATGA ACGCCAACAT CCGCACCATC GGCGGCGCGT TCGGCAGCAG CGTGGCGGCG
AGCGTCCTGG CCACCGGCGT CACCGCCGCC AACCCCCTGC CGAAGGACGC CGGCTACACG
CACGTGTTCT GGCTCCTCGC CGCCGCGGCG GTCCTCGCGA CCCTCGCGGC CCTGATCATC
CCGGCGGTCA AGGCGCGATC GGCGCCGACC ATCGACGAGC TGAGCGTGGA CGACGGCGCG
GTTCCCGCCG CCGCTTAG
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| Protein sequence | MPRRPAETSR PHYNVIFAVL LIGISAYAVL QSLVAPVLAT FITALHTTQD TATWLMTAYL
LSASVATPIL GRIGDKVGKE RMLVLTLLAL TLGSGLAALS HSVALMIIAR AIQGLGGGLL
PLSFGIIRDE FPPEKVNSAI GLGSATVAVG GGLGLLIAGP IVTHLNYHWL FWIPMVLTAI
ATVACWRFVP ESPVRTPGKI SWGAAVLLSA WLVMLLLAVS EGPTWGWGST KVIGLFLGAV
VCLPLWILTE LKSSAPLIDM RMMRLPAVWT TNVVALLFGV GMYTVMTFLP QLVQTPRATA
GYGLSASITQ SGVYLLPMTI GMFLLGIAAA PLAKRIGLKA VLVLGCAVSI PGFAALAFGH
SQGWEIYLAC GLLGIGIGLA FASMSAIVVQ SVPAAQVGVA SGMNANIRTI GGAFGSSVAA
SVLATGVTAA NPLPKDAGYT HVFWLLAAAA VLATLAALII PAVKARSAPT IDELSVDDGA
VPAAA
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