Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4120 |
Symbol | |
ID | 8335474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4661555 |
End bp | 4662754 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644957223 |
Product | hypothetical protein |
Protein accession | YP_003114825 |
Protein GI | 256393261 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.29772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAATG TGTTCACCGT GTGCTTCAGC GGAACATCGT GCACACGGGA CGAGGGAGAG GTATCACGTC CCGGCAGCGA CAAGGACATC TACGACCCGG CGACGGGCTA TATCCCGGTC CGGATCCACA AGGAGCTCAC CGGCAGTCTG ACCGCGACCA GTCCGAGCGT GACGGTGCGC GGCGTCGGCG AGAACGACTG GGCGGTGCCG CGCAACAACA GCGAACCACT GGTGTTGGAC GGTCCGCTCA GGGCGCCAGC CGATCTGCTC AAGGACGCCA AGCCGTACTC CGGCGGCGAT CAGCGTTCGA GGGTGTCCGC GCTGTCGGGG TGGGACGCCG CCGCGCTCGC GCTGCACGCC GCGAACCTGG CGGCACGCAG CGGGGCGAAG GCGTTCAACT TCATCGGGCA CAGCCGCGGC GCGGTGGAGT GCGTCATGGC CGCCTGGTTT TTGCAGGCGT ACGGCTCGCC GGAGGTGCAG GCCGTCCCGG TGCGCATCCT GGCGATCGAC CCCGTTCCCG GACCGGGCAA CTGGTACGGG ATCTTGACCC AGCTTCCGCC GAACGTCGTG GAGTACGTCG GCGTCACCGC CTGGGACATG CTCGACACCG GCTTCGACGG CGTCGTGCCG CGGCCCAACG CCAAGATGGC GGGCACCTCG CAGACCCTGA AGCTGGGCAC CGGCAGCTGG ACCAAGCTCG CCGACAACTA CCAGCTCACC GATCCGCTGG CGCCGGCCAA GAGCGGCATG GGGCAGCCCA CCGGATACCG GCTGTTCGCC TGCCGGGGAC GGCACGCGAC GGTCGCGGGG AACATGACCA GCAACGGTGA GTACAACGCC GCGGACGTCA ACGCGAGCGC CGCGCGGGTG CCCGAGCTGG TCTACCGGCT CGCGCGCGCC TACCTCACCA GTTGGGGCTC GGAGTTCAAG GTGAAGTCCG GGGTCGACAC CTACTCGCTG CCGCTGCGGC AGCAGATCAA CCTCGACCAG GCGGTGTTCG ACAACATGGC CGGCGGACCG CTGCGCGACA GCGTGCGGCC GGGGCGGCCG TACGTGCGTC AGGTCTCGTC GATATCCGGG CGCAATCCGT TCAACACGTA CTACCTCGAA GACGTCGTGG GCGATCCGCC ATACCGGCAG CCGTACCCCG TGACCGCCGC CCGCACGGGC GCCGGCTGGG TCGACTGGAC CTTTCTGTAG
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Protein sequence | MGNVFTVCFS GTSCTRDEGE VSRPGSDKDI YDPATGYIPV RIHKELTGSL TATSPSVTVR GVGENDWAVP RNNSEPLVLD GPLRAPADLL KDAKPYSGGD QRSRVSALSG WDAAALALHA ANLAARSGAK AFNFIGHSRG AVECVMAAWF LQAYGSPEVQ AVPVRILAID PVPGPGNWYG ILTQLPPNVV EYVGVTAWDM LDTGFDGVVP RPNAKMAGTS QTLKLGTGSW TKLADNYQLT DPLAPAKSGM GQPTGYRLFA CRGRHATVAG NMTSNGEYNA ADVNASAARV PELVYRLARA YLTSWGSEFK VKSGVDTYSL PLRQQINLDQ AVFDNMAGGP LRDSVRPGRP YVRQVSSISG RNPFNTYYLE DVVGDPPYRQ PYPVTAARTG AGWVDWTFL
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