Gene Caci_4111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4111 
Symbol 
ID8335465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4643603 
End bp4644805 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content71% 
IMG OID644957214 
Producthistidine kinase 
Protein accessionYP_003114816 
Protein GI256393252 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACGC GGGCCGCGGC GGTGCTGGCG TGCCGGATCG CTTCGGGGTT CTTGGTCGCG 
CTGGTGCTGC TTGGTTTCTG CGCGTATCGC GTGGTGCTTG ACGAGCAGCG GACGCAGGCT
CGGCATCAAC TGAGTATGGC GCTGGCCATG GACAATCCGG ATGTCGCGAT TCCGTGTGTG
TGGTTGTTCG AGGTGCAGGG TGCGAGTGTT CGGCATGCGC AGCAGATTCC GGCGGGGTTC
CCGCTCGCGT CGGCGGTGAA CGGCGCGCAG GACGGTGCGG CGCCTTCGCT GACGCATGTC
ACGGTGAGCA AGACCGACTT CGATGTGCTG ACCGTGCGGC GCGGCGGGGT GGTGCGGCAG
GCGGTGTTCG ACACCTGGTA TCAGCAGGCT GATCTGGATC ACTTGGTGCG GGCGTTGCTG
CTGGTCGGGC TGATCGGGGT GGTGATGGCC ACGATCGTCG GCGCCTTGTT GGGGCGGCGG
TCGATCGCGC CGCTCGGGGA CGCGCTGGAG CGTCAGCGGC GGTTCGTGGC CGATGCCAGT
CATGAGCTGC GCACGCCGCT GACGCGGTTG CACACGCGCG CGCAGATGTT GTTGCGGTGG
CAGGAGGAGC AAAGGCAGGC CGAGGCGTTG CCGACCGAGG TGTCGGACCG GCTCGGCGGC
GAGCTCAGCG CGATGGTCGG CGCGGCCGGC GAGCTGAACG AGGTGGTCGA GGACCTGCTG
ATGTCCGCCG GCATGCGCAC CGACCCGACC CGCTGCGAGC GCTTCGACCT GGCCACGCTC
GCCGCCGAGG TGATCGAGGC CGAGCGCCCC CGCCTGGGCT CGCGCGTCCT GGTCCTGCAC
ACCGTTGGCG ACCACCTGGC GATCAGCGGC GCCCGCTCCT CCCTGCGCCG CATGATCTCA
ACCCTGGTCG ACAACGCCAT CAGCCACACC GGCCCGACCG GACGCATCGA GATCTCCCTG
CGCCCAGCCG GCCGCGCCAT CGTCGAACTC GAAGTCACCG ACGACGGCAC CGGCTTCGAC
CCCGCCGACC GCGACCGCAT CTTCGAACGC TTCGCCCAAA GCGGCAGCCC CGCCGCCCAC
CACTTCGGCC TCGGCCTGGC CCTGGCCCGC GAGATCGCCA CGGACCACGG CGGCACGATC
CGCGCGGTGG GGCAGCTGGG GGAGGGCGCT AGCTTCACGG TGCGGCTGCC GGTGCGGGGG
TGA
 
Protein sequence
MLTRAAAVLA CRIASGFLVA LVLLGFCAYR VVLDEQRTQA RHQLSMALAM DNPDVAIPCV 
WLFEVQGASV RHAQQIPAGF PLASAVNGAQ DGAAPSLTHV TVSKTDFDVL TVRRGGVVRQ
AVFDTWYQQA DLDHLVRALL LVGLIGVVMA TIVGALLGRR SIAPLGDALE RQRRFVADAS
HELRTPLTRL HTRAQMLLRW QEEQRQAEAL PTEVSDRLGG ELSAMVGAAG ELNEVVEDLL
MSAGMRTDPT RCERFDLATL AAEVIEAERP RLGSRVLVLH TVGDHLAISG ARSSLRRMIS
TLVDNAISHT GPTGRIEISL RPAGRAIVEL EVTDDGTGFD PADRDRIFER FAQSGSPAAH
HFGLGLALAR EIATDHGGTI RAVGQLGEGA SFTVRLPVRG