| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4050 |
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| Symbol | |
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| ID | 8335403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4578331 |
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| End bp | 4580904 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644957153 |
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| Product | DEAD-like helicase |
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| Protein accession | YP_003114756 |
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| Protein GI | 256393192 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.429268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.150657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCCGC TCGACGTTGA TTTCGAAGCC CGTCTGGCCG CCTTCGCCTC GTCGAAGTTC
ACCAAGCTAC GCACCGGCCA GCGGCTGGTC CTGCAAGAGT ATGCCGCCAC CCATACAGCG
ACACGCGATC TCGCAGTGGA AATGCCCACC GGCGACGGCA AGACGCTGGT GGCCCTCCTC
GTTGCCGATC TTGCGCTCGA CGAGGGCAAG TCGGTCGCTT ACCTGGCGGG TACACGCCAG
CTCGCCGCTC ATGTGCAGCG AGAAGCGGAT GCCCTGGGGC TCGACACCGT CCGATTTTCC
GGCGGTCAGT ACGGCGGGCA AGCGCTGGAC GACTACCACC AGGCACAGGC CATAGCCGTG
ATGAACTACT GGGTCTACTT CAATGGCAAG CCGGTACCTC AGCCTGCCGA CCTGGTGATC
TTCGATGATG CCCACCTCGC CGAGCAGCCT TTGACCGGCA TGTATACGCT GCGGATTCCG
AACGATGACG GAGAAGGAGG CGCCCTCTAC GAGGCGCTCT GCGATCTGGT CCTTGCGCAT
ACCGACAGCT ATTCGAGTTT GCGGGCGATG CGCGACGGAA CCGCACTTCC GGGGACAGTG
CCGGAACTGA TCGCGTTCAA CGACTGGGCG GCCATCGCCA ACGTCGCGGC CGGGGTGATC
CAGTCGTCGC CTTTCACTAG CGGGAAGGAG GCGACGTACG CGTGGAAGCA AGTACGTGAC
CGCTTGCCGC GATGCGGCGT GCTGGTTGGG CCCTCGACAC TCGAGATTCG CCCGTATCAT
CCGCCCACAT CGTTGAACCC GTGGTACAGC AAGGCCAAGC AGCGGCTGTA CCTTTCAGCC
ACCCTCGGCA CGATGGACGA CCTTCAGCGG CGCATCGGCG GCAAGCAGAT CGCCCGTCTT
CAAACCGCTG AGCCCACGCC AGCAGCCAGC ACTGGGCGCC GACGCCTCGT CTTGAACCCA
AGTTCCGCGA GGAGCCTGGA TCCAGAAGTA TTTGACTTTG CCCTCAGTCA GGTCCCGGCT
GCCGGAGGTC GGACAGCGTG GCTGTGTGCG AGCCATAACG AAGCCGACGC GATTGAATCC
CGCCTGCGTG GCCTCGGAGG GGCGGTCTTT AGCCTGCGAG GCGGCAGAGA CGAGGTTCTC
GAGGCATGGC GGGCCGCTCC GTCAGGGCAT CTGGTCACTG CCGGCCGATA CGACGGGCTC
GACCTAGCCG AGGACCTGTG CCGTCTGGTC GTCTTGCCGA CTGTCCCGCA GGCGAGCAGT
GAGTTCGAGC GATTTGCGGT TGCGTATCTC GGAGATGCCT CCTTCATGCG CCACCGTGTC
GGTCAGCGGA TCACTCAGGC ACTCGGCCGT GCCAACCGCA CGCCAACCGA TCGAGCGCTC
TATTTGGCCC TTGACCCAGC CTTTGCGCAC TTGCTTGCCG ACCCGATCGT AAGACGCTCA
ATCACCCCGG ACGCTGAGCC TGTCGTGCGG GAAGCACTCG CTCGCCATGG CGAGGGATGG
GCCGGAGCCC GTGCCGCCTG CGAGGAGTTC TGGGATCCGC AGTCGGACTC GTCGGCGGAC
GACGGCGGGA CCGGCGCCGG GCCGCGCAAA CGTCGTCCAG GACGTGCGGC AGGCGGCGCG
GCCGAAGTGC ATAGCGCGGA CAATGAAACC ACTGCGTCCG CCGAACTATG GCTGGGCGGG
CACAGCGCTG CCGCCAACGC GGCCAAGGCG GCGGCAGCAG AACTCGCGGC TGCAGGCGAG
AGCGAAAACG CCGCCTTCTG GCGGTACATC GAGGCCCATG CCCACTTTGA TCGCGGACGG
CCGCAGGACC TCGCGCAGGC TCACGGCGCA CTGCGTGAGG CGATCGCCGC TGGTCCGCAC
ACAGCGTGGT TCCGCCGTCT TGCACGCACT GCCGACGAAC TAGACGGCCG AAAGCCCACG
ACGCAACCGG GCCTGGACGA TCTGTTCCTC GTATGGGACG AGTGGGTCCG TGAGAGCGGC
GCGTCTGCCA TCGAGAGGCA GTTGAACGCG GCACGGGCAC TGATGACCGG GAACCACGAC
CAGCAGTGCG AGGCGCTCGT CGCCCTCGCC CGGTTGTGCG GCGTCCACGG GAATCGGCCG
CCCAAGACGG AGCAGAGTGC AACGGACTGT AGGTGGCTGT GGACGGTGCC CAAGGGCGGC
GAACGTCGCG TCTGGGAGGT CAAGACTGGA CGTCCTGAGA AGATCCCGCG TGGTGATGTA
AACCAGTTGC TTGGTCAGAT TGAGGTGGAA CGTAAGCGTG CCCCAAAGAC GCATGTGACA
GGCTGCCTGC TCAGCCCAGT ACTGGAAGTG GAGGAGGCCG CTGCCGAAGC GTCACGAGAC
AGCATTACGC TGCTTCACCA CGGTGCTGCT GTGCAGCTCT TCGATTTGCT GGCGGACCGT
TTCCGCAGAT ATGTGGCGCT GTGGGAAGAC GGGCGCGGCG AGGCGCGTGG GAGCGCCCGT
ATCGGCGTCG AGCCGTTACT GCCAACCCAT GGCTGGCTCG AGCGGCTGCT CGCACCATCC
AATGGAAGAA TCGTCATCGC AGCTAACATT GCTGAGCTTT TCGGTCACAG CTGA
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| Protein sequence | MAPLDVDFEA RLAAFASSKF TKLRTGQRLV LQEYAATHTA TRDLAVEMPT GDGKTLVALL
VADLALDEGK SVAYLAGTRQ LAAHVQREAD ALGLDTVRFS GGQYGGQALD DYHQAQAIAV
MNYWVYFNGK PVPQPADLVI FDDAHLAEQP LTGMYTLRIP NDDGEGGALY EALCDLVLAH
TDSYSSLRAM RDGTALPGTV PELIAFNDWA AIANVAAGVI QSSPFTSGKE ATYAWKQVRD
RLPRCGVLVG PSTLEIRPYH PPTSLNPWYS KAKQRLYLSA TLGTMDDLQR RIGGKQIARL
QTAEPTPAAS TGRRRLVLNP SSARSLDPEV FDFALSQVPA AGGRTAWLCA SHNEADAIES
RLRGLGGAVF SLRGGRDEVL EAWRAAPSGH LVTAGRYDGL DLAEDLCRLV VLPTVPQASS
EFERFAVAYL GDASFMRHRV GQRITQALGR ANRTPTDRAL YLALDPAFAH LLADPIVRRS
ITPDAEPVVR EALARHGEGW AGARAACEEF WDPQSDSSAD DGGTGAGPRK RRPGRAAGGA
AEVHSADNET TASAELWLGG HSAAANAAKA AAAELAAAGE SENAAFWRYI EAHAHFDRGR
PQDLAQAHGA LREAIAAGPH TAWFRRLART ADELDGRKPT TQPGLDDLFL VWDEWVRESG
ASAIERQLNA ARALMTGNHD QQCEALVALA RLCGVHGNRP PKTEQSATDC RWLWTVPKGG
ERRVWEVKTG RPEKIPRGDV NQLLGQIEVE RKRAPKTHVT GCLLSPVLEV EEAAAEASRD
SITLLHHGAA VQLFDLLADR FRRYVALWED GRGEARGSAR IGVEPLLPTH GWLERLLAPS
NGRIVIAANI AELFGHS
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