| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4031 |
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| Symbol | |
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| ID | 8335384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4562127 |
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| End bp | 4563455 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957137 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003114740 |
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| Protein GI | 256393176 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.148527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00766622 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGTCG CGACCTTCGA ACGTGAGGCG CTGACCGATG ACGAGCAGCA CCTGGTGCGC
AAGCTGCGCG CCTCGGTCGG CGCCCGGCTG GCCGAGCGCG TCGGCGACAA CTCCGGGAGC
GTCGAGCGGG AGCGGGTCGG TCGGGAGCTG ATCGACGACG CGTTGATGGC CCACGCCCGC
GCCGGGCTGG CCGGCGGCGG CCGGGACGTG TTGGACGGCC AGGCCGAGGC CAAGGTGAGC
CGGGCGGTGT TTGACGCGCT GTTCGGCATG GGCGGTCTGC AGCGTTGGCT GGACGACCCG
TCGGTGGAGA ACATCACGGC CAATGGCTTC GACCATGTCT TCGTCCACTA CTCCGATGGC
AGCAAGGTCC CGGTTGGGCC GCTGGCCGCG TCCGAGGAGG ACTTCGTCGA CCTGCTGCGT
ACGATCGCGG CACGGGCCGG CACCGAGGAG CGGATCTTCG ACCGTGCGCA TCCGCAGCTG
AACATCCAGC TGCCCGACGG GTCCCGGCTG TTCGCGGTGA TGGCAGTGTC CCGCCGGGTG
TCGCTGACCG TGCGCAAGCA CCGCCACATG GCCACCTCGC TGCGGGAGCT CGCGGCCCTG
GGCATGTTCG ACCTCGACAT CGCCGCACAG CTGGAGGCCG CGGTACGGGC CAAGCTGAAC
ATCCTCATCT GCGGCGCCAT GGGCGGCGGC AAGACCACGG TGCTGCGCGG CCTGGCCGCG
TGCATCGGAC CGGAAGAGCG GCTGGTCACC ATCGAGGACA CCTACGAACT CGGGCTGGAG
CAGGCGCACC CCGACGTGGT GGCGATGCAG GCCCGCGAGG GGAACCTGGA GGGCCAGGGC
GCCGTGTCGC AAGCCGAGCT GGTGCGGATG TCGCTACGGA TGAACGCCTC CCGCGTCATC
GTCGGCGAGG TCCGCGGCGA GGAACTGGTG CCCATGCTCA ACGCCATGAC CATGGGAACC
GACGGCTCGC TGGGCACCAT CCACGCCTCG TCGTCCAAGC AGGCGTTCGA CAAGATGGCC
ACCTACGCCA TCCAGTCACC GGAGCGCCTC GACCGCGCGG CGACGAACCT GCTGGTCGGC
ACCGCCCTGC ACGTCGTGAT CCAGCTGGGT CGGCTGCGCG ACGGCACCCG CGTACTGTCC
TCGATCCGGG AGATCACCGG CGTCGGGGAC AACGGCGAGG TCACCAGCAA CGAGGTCTAC
AAGCCCGGCC GCGACGGCCA GGCCGTACCC GGAACCGGCT GGACCGCCGG CACCGCGCAG
CGCCTGATCG ACGCAGGGCT GGATGAGGAT GTGCTCACGC GTTCGGCGCG CGCGGGGTGG
TCGATATGA
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| Protein sequence | MSVATFEREA LTDDEQHLVR KLRASVGARL AERVGDNSGS VERERVGREL IDDALMAHAR
AGLAGGGRDV LDGQAEAKVS RAVFDALFGM GGLQRWLDDP SVENITANGF DHVFVHYSDG
SKVPVGPLAA SEEDFVDLLR TIAARAGTEE RIFDRAHPQL NIQLPDGSRL FAVMAVSRRV
SLTVRKHRHM ATSLRELAAL GMFDLDIAAQ LEAAVRAKLN ILICGAMGGG KTTVLRGLAA
CIGPEERLVT IEDTYELGLE QAHPDVVAMQ AREGNLEGQG AVSQAELVRM SLRMNASRVI
VGEVRGEELV PMLNAMTMGT DGSLGTIHAS SSKQAFDKMA TYAIQSPERL DRAATNLLVG
TALHVVIQLG RLRDGTRVLS SIREITGVGD NGEVTSNEVY KPGRDGQAVP GTGWTAGTAQ
RLIDAGLDED VLTRSARAGW SI
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