Gene Caci_4010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4010 
Symbol 
ID8335363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4542203 
End bp4543033 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content69% 
IMG OID644957118 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_003114721 
Protein GI256393157 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0182619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00403882 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAGC TCTCCCTCCT GCCCGCCGTC CGTCCCAGGC CCTCAGCCCC GGCCTCCGCA 
GTCGCCGCGA CCTCCGGGGC CGCGTTCGAC GAGGCCGTCG CGCTCACCAG GGCACTGAAG
CTGCCGCACA TCCGCCGGGC GATGACCGAC ATCATCCCCA CCGCCAAGGC CCAGCGCTGG
GACCCGGCCG AGGTCGTGCG CGCTTTGCTG GCCGAGGAAG CTGCCGGCCG CGCCGCCTCC
AACCTGCGCA CCCGCCGCCA ACGCGCCTCG TTCCCGACTG GCAAGACCTT CCACATCTGG
AACGAGGACG CCTACTCGAT CCCGATCCCG ACGCAGTCCG CGCTCCGCAC GCTGGAGTGG
ATCGGCCGGC AGGAGAACCT CTGCGTGGTC GGTCCTTCGG GCACGGGCAA GAGCCACTTC
ACCGAGGCCC TGGGCCAGGC CGCGGTCGAC GCCGGGATGA CAGTGGCCTG GTTCACGATC
GAGGACCTCG GGGGCCTGGT CCGCCGACAT CGCGTCGACG ACTCGGTCAC CAAAGCCTTC
GCCCGCCTAA CCAGGACCGA TCTCGTGATC GTTGACGATA TTGGGCTATT GCCGGTCTCC
GCCGACGCAG CCGAGGGCTT CTACCGCCTG GTCGACGCCG CCTACGAGCG CAAAAGCCTG
GCCGTCAGTT CGAATCTTCA CCCGTCAGGC TTCGACGAGA TCATGCCCAA GACCCTGGCC
ACCGCGACCG TCGACCGGCT CCTGCACCAC GCACACGTCG TCGTCACCGC CGGAGACAGC
CACCGGCTCT CCGAGGCTGT CAACGGCAAC GGGGTCGTCG CACTCAGCTG A
 
Protein sequence
MTELSLLPAV RPRPSAPASA VAATSGAAFD EAVALTRALK LPHIRRAMTD IIPTAKAQRW 
DPAEVVRALL AEEAAGRAAS NLRTRRQRAS FPTGKTFHIW NEDAYSIPIP TQSALRTLEW
IGRQENLCVV GPSGTGKSHF TEALGQAAVD AGMTVAWFTI EDLGGLVRRH RVDDSVTKAF
ARLTRTDLVI VDDIGLLPVS ADAAEGFYRL VDAAYERKSL AVSSNLHPSG FDEIMPKTLA
TATVDRLLHH AHVVVTAGDS HRLSEAVNGN GVVALS