Gene Caci_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3982 
Symbol 
ID8335335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4516295 
End bp4517092 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID644957096 
Producthypothetical protein 
Protein accessionYP_003114699 
Protein GI256393135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.163543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.279453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AGCTCATCGA TACCCGGTTG TTGGAGCAGT TGACCGAGGA ATCGCAGGAC 
TTGAACAGCG ACGCGGTTCG GATCACGCGG GAGGCGCTGG CCGAGTACGC GCAGGCCGGG
CCCGAGCCCG AGCTGCGGCG CCGCAGGTGG CGTCGGGGCG GTGCGCTCGC CGGGGCGGCG
GCCGGCGGCG CGGTGCTGCT GGGCGCGGCA CGCGCGGCGG CGGCCAGTCC CAGTGACGAC
ATCATGGCGC TGCAGACGGC CGCGTCGATC GAGAATCTGG CGGTGAGCGT CTACACCACC
GCGGCCGGAC TGCCGTTCAT CAAGAACGGC AACGCCACGG TGGCGGCATT CATCGCCAAG
ACGACGAGCC AGCACACGGC ACACGCGCAG GCCTTCAACG CGGCGGCCAC CCAGGCCGGC
GGCAAGGCTC AGACCGCTGC CAATCCGAAA TACGCCGCTG TGGTGCAGCA GATGCTGCCC
TCGATCAAGG CGCCCGCCGA TGTCGTCAAG CTGGCGATCA CGCTGGAGGA TGTCGCGGCC
CAGACCTACA CCGCCAACGT CGCGCAGGTC AGCACTCCGG AGCTGCGCAA GCTGTTCGGC
TCGGTGGCGC CGGTCGAGGC TCAGCACCGG GCCACGCTGC TGGCCGTACA GGCGCTGCTC
GCCGGCGGCG CACCGGAGCT GATCGCCATC CCGACCGACG TGGCGAAGCT GCCGGCCGCT
GCGGGCAGCG TCGGATTCCC CGACGCCTTC TACCCGACCA AGAACGCCTC GCCGATCAGC
GAAGGGGCCG TGAAGTGA
 
Protein sequence
MAEELIDTRL LEQLTEESQD LNSDAVRITR EALAEYAQAG PEPELRRRRW RRGGALAGAA 
AGGAVLLGAA RAAAASPSDD IMALQTAASI ENLAVSVYTT AAGLPFIKNG NATVAAFIAK
TTSQHTAHAQ AFNAAATQAG GKAQTAANPK YAAVVQQMLP SIKAPADVVK LAITLEDVAA
QTYTANVAQV STPELRKLFG SVAPVEAQHR ATLLAVQALL AGGAPELIAI PTDVAKLPAA
AGSVGFPDAF YPTKNASPIS EGAVK