| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3930 |
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| Symbol | |
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| ID | 8335283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4464937 |
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| End bp | 4465962 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957052 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003114655 |
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| Protein GI | 256393091 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0390546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.187548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATCC TGATCCTCGG CGGAACGTGG TTTCTCGGCA GGGCGATCGC CGCGTCGGCG
ATCGAGCACG GCCATCAGGT GACCGTTTTC AACCGGGGCC GTTCCGGTGG CGACCCTGAC
GGGGCCGAGG CGATCCGGGG CGATCGGGAG TCCGAAGACG GCCTGAAGCG CCTGGCTGGG
TCCGGGCCGT GGGACGTGGT GGTGGATCCC TCGGGACAGG TCCCGCGCGT GGTTCTCGCG
TCAGCGCGCG CCCTGGTCGG CAGCGGCCGG TATGTCTTCG TGTCGTCGGT GTCGGCATAC
GCCGGCTGGC CCATCGATCC CCTGACGGAG ACCTCGGCGC TGTTGGAGTC ACGCGCGGAC
GCCGGTCCCG AGTTCGGGTA CACCGACCCC CGCGGCTATC CCACCCAGTA CGGATTCGCT
AAGGCCGGCT GCGAGCAGGC CGTCTTGGAC GTGTTCGGCC CGGACCGCGC CACCATTCTG
CGGCCCGGCG TCATCCTCGG ACCTTGGGAG TACGTCGGTC GCCTGCCATG GTGGCTCCGC
CGGGTCGCCG AGGGAGGCCG TGTCCTGGCC CCCGGCGACC CGAACCAGCT GATCCAGCCC
GTCGATGTCC GTGACGTGGC GGACTTCGCG ACCCGTACCG CCGAGCACGA TTTCGGCGGT
GCATTCAACG TCACCGCTCC TGCGAACCAC ACTACCTTCG CCGGGTTCCT CGAAGCCTGC
CGCCAGGTCA CGGGATCAGA CGCGGAGTTC GTGTGGGTAG GCGACGACCA ACTGGCCGCC
GTCGGGGTTC GGCAGTGGAC GGAGATTCCG CTGTGGCGAT CGGTCGGCGC GTTCCCCGGG
ACGTGGAAGG TGTCCTCGGC GAAGGCAGCG GCGTCCGGCC TCTCTGCCCG CACCATCCGG
GCCACGGTGG CAGACACCTG GCAGTGGCTT ACTTCCGGCG GGCAAGCCGT CGCCAGCGCG
CGGGCTTCAG AGCTGGGCAT CGATCCCGAG AGGGAAGCCG AAATACTGGC CTGCGCCGGA
CGTTAG
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| Protein sequence | MRILILGGTW FLGRAIAASA IEHGHQVTVF NRGRSGGDPD GAEAIRGDRE SEDGLKRLAG
SGPWDVVVDP SGQVPRVVLA SARALVGSGR YVFVSSVSAY AGWPIDPLTE TSALLESRAD
AGPEFGYTDP RGYPTQYGFA KAGCEQAVLD VFGPDRATIL RPGVILGPWE YVGRLPWWLR
RVAEGGRVLA PGDPNQLIQP VDVRDVADFA TRTAEHDFGG AFNVTAPANH TTFAGFLEAC
RQVTGSDAEF VWVGDDQLAA VGVRQWTEIP LWRSVGAFPG TWKVSSAKAA ASGLSARTIR
ATVADTWQWL TSGGQAVASA RASELGIDPE REAEILACAG R
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