Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3890 |
Symbol | |
ID | 8335243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4407766 |
End bp | 4409886 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644957016 |
Product | KAP P-loop domain protein |
Protein accession | YP_003114619 |
Protein GI | 256393055 |
COG category | [R] General function prediction only |
COG ID | [COG4928] Predicted P-loop ATPase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.329172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0371093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCCA ATGAGCTCTA TCGCGACAGC ACGGTCGACG GTTCGCCAAC GGCCCCCGAC CTGCTCGACC GTGCCAGGTA CGCCGAGCAC CTGGTGAAGC TCCTGGACCG CGTTGCCGAC GGCGACGACT CGAGCGTGCT CGCGTTGATC GGGCCGTGGG GTTCGGGTAA GTCCAGCGTC CTGGAAATGG CTACTGCCCA TCTTCGCTCG GGCGGTGGCG AAGAGACATG GCTCATCGGT GAGTGCAACC CGTGGGCCTA TGCCGACCAG GAGTCGCTGA TCCTCGGGTT CTTCGCGGAA CTCCGCGCGG CGCTGCCCAA GGGCGACCGC TGGAGCGAGA CGCGGATGCG CATCGGCGAG ATCGGTGCTT CCGCCAGCCG CCTGGGCAAA GTGGGTGCCT TCGTCAGGAT GGACGCGAGC GGACCGGTCG ACGCAGTGAC CGCGTTGATC GCAGGCGACA ACGGAGCGGC CGCGATCAGG AAGCGGGCGA TCGAAAGTCT GGGGGGCGTG GGGCGGCCAA TCTTGATGGT TCTTGATGAC CTGGACCGGC TCACGCCCAG CGAGCTGCTG ATGGTATTCA AGTTGGTCCG ACAAGTCGGG CGTCTGCCGA ACGTCTACTA CCTCTTGTGC TACGACGAGC AGACTCTCCT GGACGTCCTG AAGCGCACGG AGCTGGTCGG AGGAGACATC CGGCGAGCTC AGGACTACCT GGAGAAGATG GTCCAGATCC GCCTTGACCT CCCCGCACTG CGCAACCCTC AGATCACCTC CTTGACCGAC GCGGCGATCG ACGCGGTCGT GCGAGAGAAC GGCGTCAGAC TGGACCGGCC GCAAACCGAC CGGATCGGCA CCGCTTACCA CTCGCATATG AAGGACCGTT TGTCGACCCC GCGTGCCATC CGACGCTTCT TCGCTCAGGT GAACGCCGCG TACGGGGCAG TCGGCGAAGA CGTCGACTTC GTTGACTTCA TGCTGATGAC GTTCGTGCGC ACCGTTGAAC CCGCGGCGTA CGCCATGCTC CACCGGCACA AGGACCTCCT TGTCGAAGGC GGGTTCACCG TGCCTGGCTA CCTCGAGAAT CAAAAGACAC CGCAGGAACG CGCCAAGGCA TGGACGGACC GGCTTCGAGG CGCGGGCGTC GCGGAGGCGG ACATCGCAGG GCTGCTCAAA CTGCTGTCAC TGATGTTCCC TCCACTGGAT GCTGCGGTCA GCGGATCGTC CGTCAAGCGC GGTGACCTGG AAGACATCTG GCGCCGCCTC GGTGTCGGCC ACGCCGACTT CTTCGACCGG TATTTCAGCT TCGGCGTCCC CCAGGAGGAC ATCGCCAACA GCACTGTCGC CGAGGGACTG CGCCAACTGA GCGTGGGGCA GCCGGGCGAC GAGCTGGCTC AGTTGACCGC CAGCCTGCGT AGCGACACCG ACCGGGTCGT TCGCAAGGTC GACGCGATGC TCGGATCACC CGAAGTGAAT CCCGGAGCGC TACTTTCGCT CCTTGTCGAC GTGTACGAGC ACGTGCCTGA GCCGATCGGG TTCCTTAACG ATGGCGGGCG GTTCGGTCTC GCGTCCCTCG GTGGAAAGCT GCTCGCCGCC CTGGGAGCAG CAGCCGACCG CGACCTGCTC AGTGGGCTGG GAACCAGCAG CACGCGTATG GAGTTCCTCG CGGTCGCAGC CGAACGCCTT CCCACGTCCG AACCCGCACG GGTGATAGTC GGGCAGATCA TCCACACGCG GCTCGAGGCC GCCGACGCCT TGGACGGAAT GCCGGACGAG CTTTTCAACC TCATCTGGCC TTGGGGTCGA ACCGATCTGG AAGGGTTGCG TACCTGGATG CGCGACCGCA TCGAATCCGG CACCTGGCCT CTTGCCGCTG TGATCGCAAG GTTTGTCACA GTCAGCTGGG CTACCGGCAA CGGCCCACCG CGCAGATCGA TTGCGCAGTT CAGCCTGAAG GATGTTGATG CCATCCTCGG GCTCCCCTCC GTCTTGGCCG AGCTCGCCGA CGAGATCGAG TCTGCCACCG GCGACGTCGA TGTGTTCGAC GCGGACCCGA CCGCGGAGAA CCGGCTGCAG TATGCATTGG GGGTGCTGAA GACAGCGCGT GACCGTGGGG CGGGCGAGTG A
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Protein sequence | MDANELYRDS TVDGSPTAPD LLDRARYAEH LVKLLDRVAD GDDSSVLALI GPWGSGKSSV LEMATAHLRS GGGEETWLIG ECNPWAYADQ ESLILGFFAE LRAALPKGDR WSETRMRIGE IGASASRLGK VGAFVRMDAS GPVDAVTALI AGDNGAAAIR KRAIESLGGV GRPILMVLDD LDRLTPSELL MVFKLVRQVG RLPNVYYLLC YDEQTLLDVL KRTELVGGDI RRAQDYLEKM VQIRLDLPAL RNPQITSLTD AAIDAVVREN GVRLDRPQTD RIGTAYHSHM KDRLSTPRAI RRFFAQVNAA YGAVGEDVDF VDFMLMTFVR TVEPAAYAML HRHKDLLVEG GFTVPGYLEN QKTPQERAKA WTDRLRGAGV AEADIAGLLK LLSLMFPPLD AAVSGSSVKR GDLEDIWRRL GVGHADFFDR YFSFGVPQED IANSTVAEGL RQLSVGQPGD ELAQLTASLR SDTDRVVRKV DAMLGSPEVN PGALLSLLVD VYEHVPEPIG FLNDGGRFGL ASLGGKLLAA LGAAADRDLL SGLGTSSTRM EFLAVAAERL PTSEPARVIV GQIIHTRLEA ADALDGMPDE LFNLIWPWGR TDLEGLRTWM RDRIESGTWP LAAVIARFVT VSWATGNGPP RRSIAQFSLK DVDAILGLPS VLAELADEIE SATGDVDVFD ADPTAENRLQ YALGVLKTAR DRGAGE
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