Gene Caci_3814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3814 
Symbol 
ID8335167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4314660 
End bp4314980 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content69% 
IMG OID644956953 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003114556 
Protein GI256392992 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.375382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.563614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGG GGGTCCTCGA GTTCTGTGTT CTCGCGCTGC TGCGCGACGG TCCGCGCTAC 
GGCGTGGAGC TGGTGCGGGA GCTCAGCTCG GTGGACGCGT TGGTGACCAG CGAGGGCACC
ATCTACCCGT TGCTGTCCCG GCTGCGCCGG GAGCAGCTGA TCGCGACAGT GTGGCAGGAG
TCGCCGTCCG GGCCGCCGCG GCGGTACTGC CGGCTGACCG AGGCCGGGGA GAAGGCGCTC
GCGGAGTTCA CCGCTGAATG GGGTCGGTTC CGGGACGGCG TGGAGTACTT CCTTACTTCG
AATGGGGGCG AACAGGCATG A
 
Protein sequence
MRRGVLEFCV LALLRDGPRY GVELVRELSS VDALVTSEGT IYPLLSRLRR EQLIATVWQE 
SPSGPPRRYC RLTEAGEKAL AEFTAEWGRF RDGVEYFLTS NGGEQA