Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3640 |
Symbol | |
ID | 8334993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4073472 |
End bp | 4074404 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956781 |
Product | hypothetical protein |
Protein accession | YP_003114384 |
Protein GI | 256392820 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.04717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00729391 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGTCACCA TCGACATGGA CCAGATGACG GCTCATGCAC TGCGGCACCT GCTCCACGGC GCGGGCGAGC ACTGGGCCGA TGGTGCGGCT CTGAGCCGGC CGACGCATGT TGACGTGGAG CGACTCGGCA CTGTTCTGCG AGCTGTGAAC AGCGCGCTGG GCGGCAACCT CCCCGCCAGT CGACTCGGCG CCCCCGAGCC GGCAATCCTC ACCCCAGGAC TTCCCGACCA CGAATACAAC CTGGCCCGCG CCCTGGCTGA TGTGGGGACA TGGCTGACGA GTACGGGCCA ACGGCATCGA GGGCTGTTCG CCTTCGACGG GGCGGTGGCG CTCTATCGGC AGCTGGCGGC CGACGATCCC GCCGTCTACG ACCCTTACCT GGCCGGCGCC CTGACCACCT TGGGCCGTCA TATGTTCATG ACGGAATTCG TGAATGAGGC GCTGTCCTCC CTCGAGCAGG CATTGGAGAT CCACCGCCGC CTGGCCGCGG ACAATCCCGC CGTCTACGAG CCCTACCTAG CGCAGTCCCT GTGCAACCTG GGCATCGCGC TCGCGGAGGT ACTGCGTCGA GACGAGGCGC TGACTCCGGT CGAGGAGGCG GTGGAGATCT ACCGCCGCCT GGCCGCGGAC GATCCCGCCG CCCACGAACC CGGACTGGCT CATGCCCTGA CCAATCTGTG CGACCGGCTA TCAGGGGTCC ACCGCGAGCA GGAGGCACTG ACCGCCCTCG ATGAGGCGGT GACGATCTAC CGCCGCCTGG CCACGGACAA CCCCGTCTAC GAGGGCCACC TGTTCCGCTT CCTCGACAGC CTGAGCAACC GCTTGTCAGG CCTGGGCCGC CACGACGAGG CCCACGCCGC CGGAGAGGAG TCGAAGGCGA TCAAAGATCG CCTGGCCGCG AGAAGTTCAG CCCGGGAAAC CACCTCGCCT TGA
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Protein sequence | MVTIDMDQMT AHALRHLLHG AGEHWADGAA LSRPTHVDVE RLGTVLRAVN SALGGNLPAS RLGAPEPAIL TPGLPDHEYN LARALADVGT WLTSTGQRHR GLFAFDGAVA LYRQLAADDP AVYDPYLAGA LTTLGRHMFM TEFVNEALSS LEQALEIHRR LAADNPAVYE PYLAQSLCNL GIALAEVLRR DEALTPVEEA VEIYRRLAAD DPAAHEPGLA HALTNLCDRL SGVHREQEAL TALDEAVTIY RRLATDNPVY EGHLFRFLDS LSNRLSGLGR HDEAHAAGEE SKAIKDRLAA RSSARETTSP
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