Gene Caci_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3640 
Symbol 
ID8334993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4073472 
End bp4074404 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content68% 
IMG OID644956781 
Producthypothetical protein 
Protein accessionYP_003114384 
Protein GI256392820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.04717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00729391 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTCACCA TCGACATGGA CCAGATGACG GCTCATGCAC TGCGGCACCT GCTCCACGGC 
GCGGGCGAGC ACTGGGCCGA TGGTGCGGCT CTGAGCCGGC CGACGCATGT TGACGTGGAG
CGACTCGGCA CTGTTCTGCG AGCTGTGAAC AGCGCGCTGG GCGGCAACCT CCCCGCCAGT
CGACTCGGCG CCCCCGAGCC GGCAATCCTC ACCCCAGGAC TTCCCGACCA CGAATACAAC
CTGGCCCGCG CCCTGGCTGA TGTGGGGACA TGGCTGACGA GTACGGGCCA ACGGCATCGA
GGGCTGTTCG CCTTCGACGG GGCGGTGGCG CTCTATCGGC AGCTGGCGGC CGACGATCCC
GCCGTCTACG ACCCTTACCT GGCCGGCGCC CTGACCACCT TGGGCCGTCA TATGTTCATG
ACGGAATTCG TGAATGAGGC GCTGTCCTCC CTCGAGCAGG CATTGGAGAT CCACCGCCGC
CTGGCCGCGG ACAATCCCGC CGTCTACGAG CCCTACCTAG CGCAGTCCCT GTGCAACCTG
GGCATCGCGC TCGCGGAGGT ACTGCGTCGA GACGAGGCGC TGACTCCGGT CGAGGAGGCG
GTGGAGATCT ACCGCCGCCT GGCCGCGGAC GATCCCGCCG CCCACGAACC CGGACTGGCT
CATGCCCTGA CCAATCTGTG CGACCGGCTA TCAGGGGTCC ACCGCGAGCA GGAGGCACTG
ACCGCCCTCG ATGAGGCGGT GACGATCTAC CGCCGCCTGG CCACGGACAA CCCCGTCTAC
GAGGGCCACC TGTTCCGCTT CCTCGACAGC CTGAGCAACC GCTTGTCAGG CCTGGGCCGC
CACGACGAGG CCCACGCCGC CGGAGAGGAG TCGAAGGCGA TCAAAGATCG CCTGGCCGCG
AGAAGTTCAG CCCGGGAAAC CACCTCGCCT TGA
 
Protein sequence
MVTIDMDQMT AHALRHLLHG AGEHWADGAA LSRPTHVDVE RLGTVLRAVN SALGGNLPAS 
RLGAPEPAIL TPGLPDHEYN LARALADVGT WLTSTGQRHR GLFAFDGAVA LYRQLAADDP
AVYDPYLAGA LTTLGRHMFM TEFVNEALSS LEQALEIHRR LAADNPAVYE PYLAQSLCNL
GIALAEVLRR DEALTPVEEA VEIYRRLAAD DPAAHEPGLA HALTNLCDRL SGVHREQEAL
TALDEAVTIY RRLATDNPVY EGHLFRFLDS LSNRLSGLGR HDEAHAAGEE SKAIKDRLAA
RSSARETTSP