| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3610 |
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| Symbol | |
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| ID | 8334963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4034002 |
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| End bp | 4036863 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644956752 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003114355 |
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| Protein GI | 256392791 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA GTCCATCGAT ATCGAGTGCC GGTACGCGGG ATCGGGAGGG GTTGTTCGTC
GGACGCGCCG ACGAGCGCCG ACGGCTAGCC GAGTGCGCCG GCCGGGTGCG GAACGGGGAT
GCCTGGCTCG CGGTCGTCGA GGGCGAGGCG GGGATCGGCA AGAGCACGCT GGTGCGGCAT
CTCGCCTCGA CGCTGAGCGA CTTCACGATC CTGTCGGCGA TCGGCGACCA GTCCGAGACG
GAGTTCCCCG GCGGGGTGTG CGGACAGCTG ACGCAGCGGG TGGACCGCGA AGTGTTGAGC
TCGTTCCCGT TGCTCGCTGA CGCGGCCTCG GCGGGACTGC CGCCGCACGC CATCGGCGGG
CAGCTCCTGC TCCTGCTCGG CGCGCTGCAG GAGGCCCGGG GTCCGGTCGC GGTGATCGTG
GACGACGTCC AGTGGGCCGA CGCGCTGTCG ATGCAGACGC TGGGCTTCGT CCTGCGCCGG
CTGTGGGCGG ACCGCGTGCT GGTCGTGATG GTGACGCGCT CGGACCAGGA CAACGTCTCG
GAGATGGACC GGCTCATCCG TTCCTTGGAG CGCACCGTCC ATCTGAAGGT CGGCGGACTG
GATGACAGCG AAGTCGCGGA GCTGGTCAAG GGTCTGACCG ACGCGCCTCC GACGCCGCCG
TTGATCAGGC GGCTCCGGGC TTATGCCCAC GGACATCCGC TGTACGTCCG GACGGTGCTG
TCCGAGGTTC CCGTCGAGAC GTTGCGCGAC GACGCGCTGG ACCGCTGGCC GGTTCCGCGC
TCGCTGCTCG TCGGCATCAA GGACCAGATG GATCGGCTCC CTCCGGAGTC TGTGGAGCTG
CTCGAGGCGA TGGCCGTCCT CGACACCCGC CTTCCGCTGG CGACCGTCGC GCAGCTCACA
CAGCTCGCGG ACCCCGCGCG GGCGCTCGGA CCGGCGCTGT CCGCCGGGCT CGCGGTGTGG
TGGCCCACGG AATCCCAGAG CCCGGTCGCC CTCGTCCACG CCCTGCAACG GGACGCTGTT
TACGACGCGA TCGATCCCGA ACGGCGCCGC GCCCTGCACG CCGGCGCAGC CGCGCTCGTC
GGTCCGGCTG CGTCCTGGGC ACATCGCGTG GCCGCTGCCG ACAGCGTCGA CGCCGCGCTC
GCCGCCGAGC TGGAGGCGTC GGCCATGGGG GAGGCGGCAA CCGGGCGGAA CGCCTTGGCC
GCGACGCGCC TGCTGTGGGC CTCGGCGTTG TCCGAAAGCC GTGAGGACCG CGAGCGCCGG
CTGCTGACCG CCTGCGCGCA GTCGCTGGTC ACGATGCAGC CGGTGGCCGC GGCGAAGCTG
AGGGCGGAGG TCGAGGACTG CGCGCCGGGA GCATTGCGCA GCTGCGTCCT CGGCGGCCTG
GACATGCTCG ACAACCGCCT CGTCGAAGCG GAGGCGCGGC TCGCAGAAGC GTGGGAGCAG
GCGCGCACCG ATCCGGGTTC GGGCTGGCTC GCGGTTCTGG CGGGGACGTT CCTGACCGTC
CTCATGATGA GGAACGTGCG CGGCGCCGAG ACCGCCGCGG TCGCCGCCCA GACGCTTGCC
GTCGGCGACC TCGACCCGGC CACCACCGAC TTCACCCGGG CCGTCATGGC CACCGGACGG
ATGTGGGACC AAGGACCGCG CGTGGCGTTG GCGGACCTCG GGCACCTGCC CGCCGAGGCC
TCCGCCGCGA CGAACCATCA GCTCGACACG CTCGCCACCC GCGGCGTCAT GCGGTTGTTC
CTCGGCGATC TCGAAGCGGC CCGGCGCGAT CTGGCGTTGG TGGCGCGGCG CGACCAGCAG
GGCGCCGGAT CCAGGCTCTC CCAGTTCTCG CTGTCGCTGC TGGCGGTGGC CGACTACCTG
TCGGGGGACT GGACGGCCAG CCAGTCCGCG GCCGAGCAGG CGCTGGCGAT CGTCGCGGTC
CAGGGCAACG TGCTGGGCGA CGCGGCCGCG GAGTTCGCGG CGGTGTGCGT CCACGCTGGA
AGCGGCCGGT GGGACGACGC CCGACGCCAC GTCGACACGC TGTCTCACCT CACGCAGATG
ATCGGCACAC CGGTCGAGCT CGTCTACGGC GTCCTGGCCG AGGCGACCGT CGCTCAGGCC
CGCGCCGATT ACGGGGCGAT GCTGCGAGCG CTCAGACCCG CGCTCGACGA CAGGGACAGA
GCCGACGCCG GGGGCGAAGT CCGCGTGCGG TACGAACCCT TCTGGCTGTG GCAGCAGTCG
CTATTGGTCG AAGGCCTTGT CGGCACCGAG CAGCTCGACC ACGCGGCCAG AGCCCTCGAC
GAACTCCGCG CGAGGCATGA CGGCACCGGC TATCTCGAGG TCGTCGTGGC GCGCCTCGCC
GGCCGCCTCG CCGAGGCCCA GGGCCGCCCC CGCGACGCCC TGAAGATCTA CGAAAAGGTC
CTCTCACAGA CGCCGGACCC AACCAACCCC TCGGCCTCGG CACCGCTGCA CCAAGCCATG
CTCGAACAAG CCCACGGACG CCTGCTGGCA GCCACCGGCG CCGCACCCCG CCGCGAAGCC
GCACGCTGGC TGCGCACGGC GCACGACCGC TTCAGCACCC TCCGCGCCAC CCCCTTCCTC
GAACGCTGCG AAGCAGACCT GTCAGCAATC GGCCTCGCCG CCCCAGCCGG CACCGCGACC
CGCGTCCTCG CCCTCACCGA ACGCGAAATG TCAGTGGCCT ACCTCATCGC CGACGGCCGC
ACCAACCGCG AAGCCGCAGC AGAGCTCTAC GTCAGCCCCA AGGCCGTCGA GTACCACCTG
TCCAACATCT ACGCCAAGCT CGGCATCTCC TCGCGACGCC AACTCGCCGA GGCCTTGCGA
ACCCAGCAGC CGCCACCGTC CGGGCGACCG GACGCGGACT AG
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| Protein sequence | MSDSPSISSA GTRDREGLFV GRADERRRLA ECAGRVRNGD AWLAVVEGEA GIGKSTLVRH
LASTLSDFTI LSAIGDQSET EFPGGVCGQL TQRVDREVLS SFPLLADAAS AGLPPHAIGG
QLLLLLGALQ EARGPVAVIV DDVQWADALS MQTLGFVLRR LWADRVLVVM VTRSDQDNVS
EMDRLIRSLE RTVHLKVGGL DDSEVAELVK GLTDAPPTPP LIRRLRAYAH GHPLYVRTVL
SEVPVETLRD DALDRWPVPR SLLVGIKDQM DRLPPESVEL LEAMAVLDTR LPLATVAQLT
QLADPARALG PALSAGLAVW WPTESQSPVA LVHALQRDAV YDAIDPERRR ALHAGAAALV
GPAASWAHRV AAADSVDAAL AAELEASAMG EAATGRNALA ATRLLWASAL SESREDRERR
LLTACAQSLV TMQPVAAAKL RAEVEDCAPG ALRSCVLGGL DMLDNRLVEA EARLAEAWEQ
ARTDPGSGWL AVLAGTFLTV LMMRNVRGAE TAAVAAQTLA VGDLDPATTD FTRAVMATGR
MWDQGPRVAL ADLGHLPAEA SAATNHQLDT LATRGVMRLF LGDLEAARRD LALVARRDQQ
GAGSRLSQFS LSLLAVADYL SGDWTASQSA AEQALAIVAV QGNVLGDAAA EFAAVCVHAG
SGRWDDARRH VDTLSHLTQM IGTPVELVYG VLAEATVAQA RADYGAMLRA LRPALDDRDR
ADAGGEVRVR YEPFWLWQQS LLVEGLVGTE QLDHAARALD ELRARHDGTG YLEVVVARLA
GRLAEAQGRP RDALKIYEKV LSQTPDPTNP SASAPLHQAM LEQAHGRLLA ATGAAPRREA
ARWLRTAHDR FSTLRATPFL ERCEADLSAI GLAAPAGTAT RVLALTEREM SVAYLIADGR
TNREAAAELY VSPKAVEYHL SNIYAKLGIS SRRQLAEALR TQQPPPSGRP DAD
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