Gene Caci_3592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3592 
Symbol 
ID8334945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp4008177 
End bp4009220 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content71% 
IMG OID644956735 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003114338 
Protein GI256392774 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.167683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC TGGCAGTGCG CTACACCGCC GCCCGTACCC TGACCACCCG CCCGGCCGAC 
ACCGAGCCTC CGGGTCCCGG ACAGGTGGAG CTGGCTCCGG CCTACGTCGC CATATGCGGC 
ACCGACCTGC GCATCTTCCA CGGCGACATG GACGCGCGCG TCAAGGCGCC CGCCGTGATC 
GGCCACGAGA TGTCCGGACG CGTGGTCCGC GTAGGACCGG GCGTCGAGGG CTATGCTCCC 
GGCGACCCGG TCACCGTGAT GCCGCTGAGC TGGGACGGCA CCTGCCTCGC CTGCCGCCGT 
GGATACCGGC ACATCTGCCA GAACCTGGCG TTCATCGGCA TCGACTCGCC CGGCGCGATG 
CAGCAACGGT GGACCGTGCT CGCCTCGACA CTCGTCCGCC TTCCTGACTC CCTCGCCCTG 
GACCGTGCCG CGCTGGTCGA ACCCACAGCG GTGGCGGTGC ACGACGTCGC CCGCGCCGGC 
GTGAGCCACG GCGATCGGGT CCTCGTGGTC GGCGCCGGAC CGGTGGGGCT GCTGATCGCC 
CTGGTCGCGC GGGCATCCGG TGGCGAGGTG CGGGTGGTGG AAAGCAATCC CCAGCGCCGC 
CGCCTGGCCG AGCAGCTGGG CCTGAACGCG TGGGACCCCA CCACCGACGT CGTCCCCGAG 
CGCCTGCGCG ACTGGACGCA GCACACCGGC GCGGACATCG CCTTCGAAAC CTCGGGCACC 
GAGCCCGGCG TGCAGACGGC AGTGGACGCG CTGGCGGTCC GAGGCCGCCT GTGCCTCGTG 
GCCATGCACC CCGGCCTCCG GCCAGTGGAC CTCCACCGCT TCGTATGGCA GGAACAAACC 
CTGATCGGCG CCCGTCTCTA CGAGCGTGCC GACTTCGAAA CCGCTGCCCG ACTCATCGAC 
GCGGGCACCA TCCCCGCCGA TCAACTGATC AGCAGAATCG TGCCTCTCAT CGACGCCCTA 
GGCGCCTTCG AATCCCTGGA GGTAGGCGGC GACGTGAAGG TACTCGTCGA CTGCGGCGCA 
TCGGTCTTGG AACGCGCGGC GTAA
 
Protein sequence
MTSLAVRYTA ARTLTTRPAD TEPPGPGQVE LAPAYVAICG TDLRIFHGDM DARVKAPAVI 
GHEMSGRVVR VGPGVEGYAP GDPVTVMPLS WDGTCLACRR GYRHICQNLA FIGIDSPGAM 
QQRWTVLAST LVRLPDSLAL DRAALVEPTA VAVHDVARAG VSHGDRVLVV GAGPVGLLIA 
LVARASGGEV RVVESNPQRR RLAEQLGLNA WDPTTDVVPE RLRDWTQHTG ADIAFETSGT 
EPGVQTAVDA LAVRGRLCLV AMHPGLRPVD LHRFVWQEQT LIGARLYERA DFETAARLID 
AGTIPADQLI SRIVPLIDAL GAFESLEVGG DVKVLVDCGA SVLERAA