| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3546 |
|---|
| Symbol | |
|---|
| ID | 8334899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3959358 |
|---|
| End bp | 3960617 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644956689 |
|---|
| Product | Beta-ketoacyl synthase |
|---|
| Protein accession | YP_003114292 |
|---|
| Protein GI | 256392728 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAC GCCGAGTGGT GATCACCGGG ATCGGCGTCG TCGCGCCGGG CGGTGTCGGG
GTGAAGGACT TCTGGAGCCT GCTGTCCGAG GGCCGGACCG CCACGCGCGG CATCACCTTC
TTCGACGCCT CGCCGTTCCG GTCGCGGGTG GCCGCCGAGG CCGATTTCGA TCCCGAGTTC
CACGGGCTGA GCCCGCAGCA GGTGCGGCGG ATGGACCGGG CCGCGCAGTT CGCGGTCGTC
ACCGCCGCCG AGGCGGTCGC CGCCAGCGGG ATCGATCCGG CGAACCTGGA CCCGGCGCGG
GTCGGGGTGA CGGTCGGCAG CGCGGTCGGC GCGACCATGT CGCTGGACGC CGAGTACCGG
GTGGTCAGCG ACGGCGGCCG GCTGGCGCTG GTGGACCACG AGTACGCCGT GCCGCATCTG
TACGACTACT TCGTGCCCGG CTCCTTCGCC GGCGAGGTGG CCTGGTCGGT CGGCGCGGAG
GGCCCGGCGA CCGTGGTCTC CACCGGCTGC ACCTCCGGGC TGGACTCCGT GGGCTACGCC
GCCGAGCTGG TGCGCGAGGG CAGCGTGGAC GTGATGATCG CCGGCGCCAC CGACGCCCCG
ATCTCGCCGA TCACCGTGGC CTGCTTCGAC GCCATCAAGG CCACCACCGC GCGCAACGAC
GACCCCGAGC ACGCCTCGCG GCCCTTCGAC AACTCCCGCA CCGGCTTCGT GCTCGGCGAG
GGCTCGGCCA TGTTCGTGCT CGAAGACTAC GAGCGGGCCC GGGCGCGCGG CGCCGAGATC
CTCGCCGAGA TCGCCGGATT CGCCACCCGC AGCAACGCCT TCCACATGAC CGGGCTGCGC
CCCGACGGCC GGGAGATGGC CGACGCCATC CGCGCGGCGC TCGCCGAGGC CAGGATGAAC
GGCGAGGAGA TCGACTACAT CAACGCACAC GGCTCCGGCA CCAAGCAGAA CGACCGCCAC
GAGACCGCGG CCTTCAAGAC CAGCCTGGGC GATCACGCCT ACCGGACCCC GGTGAGCTCG
ATCAAATCCA TGGTCGGACA CTCCCTCGGC GCGATCGGCT CGATCGAGAT CGCCGCCTCG
GTCCTGGCGA TCGGCACCAA CCTGGTCCCG CCGACGGCGA ACCTGCACGA GCCGGACCCC
GAATGCGACC TGGACTACGT GCCGCTGACC GCCCGCGAGC ACCAGACCGA CGCGGTGCTC
ACCGTCGGCA GCGGCTTCGG CGGGTTCCAG AGCGCGATGG TGCTCCGGAG GGTCTCATGA
|
|---|
| Protein sequence | MTGRRVVITG IGVVAPGGVG VKDFWSLLSE GRTATRGITF FDASPFRSRV AAEADFDPEF
HGLSPQQVRR MDRAAQFAVV TAAEAVAASG IDPANLDPAR VGVTVGSAVG ATMSLDAEYR
VVSDGGRLAL VDHEYAVPHL YDYFVPGSFA GEVAWSVGAE GPATVVSTGC TSGLDSVGYA
AELVREGSVD VMIAGATDAP ISPITVACFD AIKATTARND DPEHASRPFD NSRTGFVLGE
GSAMFVLEDY ERARARGAEI LAEIAGFATR SNAFHMTGLR PDGREMADAI RAALAEARMN
GEEIDYINAH GSGTKQNDRH ETAAFKTSLG DHAYRTPVSS IKSMVGHSLG AIGSIEIAAS
VLAIGTNLVP PTANLHEPDP ECDLDYVPLT AREHQTDAVL TVGSGFGGFQ SAMVLRRVS
|
|---|
| |