Gene Caci_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3447 
Symbol 
ID8334800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3818270 
End bp3819046 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content72% 
IMG OID644956591 
ProductThioesterase 
Protein accessionYP_003114194 
Protein GI256392630 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00216079 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCCGA AGCCCGCGGC GTTCTCTGCT TCCGGCGGCG GGTCCCGCCC CGCCGCCGCG 
AAGTCCCGCT GGCTGCCGCG CGCCCCGTCG CCCGCGGCAG CCGCCCGCGT CTTCGCCATC
CCCTACGCGG GCTGCGGCGC CGGGCTGTAC CGCAACTGGC CGCGCGGACG CGGCGCCGTG
GAGTTCCTGC CGGTCGAGCT CCCCGGCCGC GAGACCCGGC TCGGCGAGCC GATGCCGGGC
TCGTTCCAGG AGCTCGGCGC GGCGCTGGTC GAGGGGATCG CGCCGTATCT GGACGTACCC
TTCGCATTGT TCGGGCACTG TTGGTCGGCG CTGGCGGCGT ACGAGGCGGC GGTGCAGCTG
GCGCTGGCCG GACTGCCCGC GCCGAGCCGG CTGTTCGTCT CTTCCCAAGT CGCACCCCAG
GACGGACCGG TTGGGCGGAT GCTGGGGATG GCGCAGGAGG AGATGGCCGA GGAGCTGGCG
ACGACTATCA GGGCCCTGGG TGGGCAGCCG CATCCGGAGC TGCTGGCGAT CTACGCCGAG
GTGCTGCGCG CTGATGTGGA CGTCAGCAAG CGCTACATCG TGCCCGATCC GCCGCGGCTG
TCCTGCCCCA TCACCGCGAT CGGCTGGAGT CAGGACACTG AGGTCCCGGC GGACCGGATG
GCAGGTTGGA CGGCTTGCGG CAGCACCGTC TTCGAGGTCT TCCAAGGACA CCATCACCGG
TTCCTGGACG CGCCTCCGGA ACTGATCGGG ATGCTGGGCG CGGACGTGGG GGTCTGA
 
Protein sequence
MSPKPAAFSA SGGGSRPAAA KSRWLPRAPS PAAAARVFAI PYAGCGAGLY RNWPRGRGAV 
EFLPVELPGR ETRLGEPMPG SFQELGAALV EGIAPYLDVP FALFGHCWSA LAAYEAAVQL
ALAGLPAPSR LFVSSQVAPQ DGPVGRMLGM AQEEMAEELA TTIRALGGQP HPELLAIYAE
VLRADVDVSK RYIVPDPPRL SCPITAIGWS QDTEVPADRM AGWTACGSTV FEVFQGHHHR
FLDAPPELIG MLGADVGV