Gene Caci_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3435 
Symbol 
ID8334788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3803898 
End bp3805046 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content71% 
IMG OID644956579 
Productprotein of unknown function DUF1006 
Protein accessionYP_003114182 
Protein GI256392618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTGA CCGACCGGGA ACTGAATCGC GCGACCCTCC AGCGGCAGCT GCTGCTGCGG 
CGCGAGCGGC TCGACCCCGC CGAGGCCGTG CGCCGCCTGG GCGGACTGCA ATCGCAAGAG
CCGGCCTCGC CGTACCTGGC GCTGTGGACC CGCCTGGCGA AGTTCGACCC GGCGGCGCTC
GACAAAGCGT TCGCCGACCG CACCGTGGTG AAGGCCTCGC TGATGCGGCT GACCCTGCAC
ACCGTGCACG GCGCGGACTG GCCCGCCTTC CACGCGGCGA TGCTCGCCAG CCTGCGCGCG
TCCCGCCTGA ACGACCGCCG CTTCCTGAGC ACCGGTCTGA CCGCCGAGGA CGCCGACGCG
CAGCTGCCGG ACCTCGCGCG TTTCCTTAGC CGCCCCCGCA GCGCCGAAGA GATCGAGAAG
CGCCTCGCCG AACGCCTCGG CGTCACCGAA CCGCGCGCCT GGTGGGCGCT GAAGATGTAC
GCACCGCTGC ACCACGCGCC GACCGGCGGA CCGTGGACGT TCGGCGCCGA GTCACCCTCC
TTCCAAGCGG CGAGGGGCGA ACTCGACCCG AAGCAGCACA CTGAGGCAGT CCACACCCTG
CTCCGCAGCT ACCTGCGCGC CTACGGCCCG GCGACCGCGC AGGACTTCGC GCAATTCACG
ATGCTGCGAC AGCCCCTGGT CAAACAGGCG CTCACCGAGC TCGACGGCGA AGTCGTCCCG
GTGAAGGGCC CGAACCGCAT GAACCTGTTC GACCTCGCCG ACCTCCAATC CGCCTCCGAT
CACCCCGACG CCGACACCCC CGCCCCGCCC CGCCTCCTCC CGATGTGGGA CGGCACCCTG
CTCGCCTACG CCGACCGCAC CCGCATCGTC CCCGCCGAAT ACCGCTCCCT GGTGATCCAA
CGCAACGGCG ACGTACTCCC GACCCTCCTG GTCGACGGCT ACGTCGCCGG CGTCTGGCGC
CCCACCGAGG GCGGCATCGA GGCAACGGCG TTCCGCAGCC TCGACAAGGA CACATGGTCC
GGCCTCGCCA CCGAAGCAGC CGCCCTGAGC CGCTTCCTGA GCAAGCGCGA CCCCGGGCTG
TATCAGCGGT ATGCGCACTG GTGGACGAAG GGCATGCCCC GCGCGGAAGT CAGGATCCTG
CCGGGCTAG
 
Protein sequence
MGLTDRELNR ATLQRQLLLR RERLDPAEAV RRLGGLQSQE PASPYLALWT RLAKFDPAAL 
DKAFADRTVV KASLMRLTLH TVHGADWPAF HAAMLASLRA SRLNDRRFLS TGLTAEDADA
QLPDLARFLS RPRSAEEIEK RLAERLGVTE PRAWWALKMY APLHHAPTGG PWTFGAESPS
FQAARGELDP KQHTEAVHTL LRSYLRAYGP ATAQDFAQFT MLRQPLVKQA LTELDGEVVP
VKGPNRMNLF DLADLQSASD HPDADTPAPP RLLPMWDGTL LAYADRTRIV PAEYRSLVIQ
RNGDVLPTLL VDGYVAGVWR PTEGGIEATA FRSLDKDTWS GLATEAAALS RFLSKRDPGL
YQRYAHWWTK GMPRAEVRIL PG