Gene Caci_3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3426 
Symbol 
ID8334779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3786131 
End bp3786862 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID644956570 
ProductThioesterase 
Protein accessionYP_003114173 
Protein GI256392609 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAAC CGTCCACGCG CTGGCTGCTG CAGGAGCCGT CCCCGGGTGG ACGTCCGCTG 
CTGTTCGCCT TCCCCTACGG CGGTTCCGGC GCGTCGTCGC TGCGCCGCTG GCCCGGACGG
ATCGGCGAGG CCGAAGTGCA CGCCGTGCAG CTCCCGGGAC GCGAGAACCG AATCAAGGAC
CTGCCATGCC GAGACTTCGC CGCCTTCGCC GAGGAGGCGG TCCGCGAGCT CGGTCCGTAC
CTGGACCGGC CCTACGCGGT CATCGGTCAC TGCATGGGAG CCCTGCTCGC CCACGCCTTC
ACCTTTCGCG CCCAACAATC CGGCGCACCG ATGCCGAACC GCCTGTTCGT CTCGGCATCG
CTGGTCCCGC AGCGCGGCTT CTACGGGCTC TACCATCCCT GGATGTCCGA CCGCCGCATC
GCGCAGGAGC TGCGCCGGGT CTCCACCGGC CTCGGTGACG GCGAGCTGCC CGACGAGGTC
GTGGCGCTGT CGGTGCCGGT CCTGCGCCGC GACGTGCGGA TGTGCCTGGA CTACGCGCCG
CCGCCGCAGC CGGTCGACGT GCCGGTGACC GCGATCGGCT GGTCGCGGGA CCTCGACGTG
GGTCCGGCGG ACCTGGCCGA GTGGCGGCAG CTGGCCAAGA GCCGCGAAGT GATGCTCCCC
GGCGAGCCGC TGGCGTTCCT GACCGCGCCG CGCGAGCTGC GGGCGGTCGT CGAGGACGAC
TTCGAATACT GA
 
Protein sequence
MTQPSTRWLL QEPSPGGRPL LFAFPYGGSG ASSLRRWPGR IGEAEVHAVQ LPGRENRIKD 
LPCRDFAAFA EEAVRELGPY LDRPYAVIGH CMGALLAHAF TFRAQQSGAP MPNRLFVSAS
LVPQRGFYGL YHPWMSDRRI AQELRRVSTG LGDGELPDEV VALSVPVLRR DVRMCLDYAP
PPQPVDVPVT AIGWSRDLDV GPADLAEWRQ LAKSREVMLP GEPLAFLTAP RELRAVVEDD
FEY