Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3407 |
Symbol | |
ID | 8334760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3757795 |
End bp | 3759396 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644956551 |
Product | Glutamate synthase (NADPH) |
Protein accession | YP_003114154 |
Protein GI | 256392590 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTGC GACTCTCAGC CGTCAGCGTC CCCGTCGCCA TGGTCCTGGT CACGGCGGCG AGCGTCTGGG CCACGGTGGC TGTCTCCCTA TGGTGGCTGT TCGCCCTGGT GCCCTTCGGT GCGCTCGCTG TGGTGGCGAT CTATGACGTC GTGCAGCGGC GGCACTCGAT TTTGCGGAAC TTCCCGCTTC TGGGGCACAT GCGCTATCTG CTGGAGGCGA TCCGGCCGGA GATGCAGCAG TACTTCATCG AGCGGGACTA TGACGGCCGT CCGTTCGACC GCGACACCCG AACGGTCGTG TACGAGCAGT CCAAGGGCAT CCACGAGGAG ACCTCGTTCG GTACCGAACT GGATGTGAAC CAGGCCGGAT ACGAGTACGT CGAGCACGCC ACGGTTCCGC TGAATCCCGA CAAGGAGCAG CCGCGGGTCC GGATCGGCGG TCCGGACTGC ACGCAGCCGT ACGACATGGC GATGCTGAAC GTGTCGGCGA TGAGTTTCGG CTCGCTGAGC GCGAACGCGA TCCGCGCCCT GAACGCCGGT GCGGCGCGCG GGGGTTTCGC GCACGACACC GGCGAGGGCG GTCTGACGCC GTATCACCTC GAGGGCGGCG GCGACCTGGT CTGGGAGATC GGCAGCGGCT ACTTCAGCGT CCGTACCCGC GACGGCGACT TCGATCCGGA GCAGTTCCGG GACAAGGTCG CCCATCCGCA CGTCAAGTGT GCCGAGCTGA AGCTGAGCCA GGGCGCCAAG CCGGGTCTGG GCGGTGTGCT GCCCGGGGCG AAGGTGACCG CGGAGATCGC CCGCTTCCGC GAGGTGCCCG AGGGTGAGAA GTGCATCAGC CCGCCCGCGC ACAAGGTGTT CGAGACGCCG CGGGAACTGG TGCTGTTCAT GGCGAAGATG CGCGAGCTGG CCGACGGCAA GCCGGTCGGC TTCAAGCTCT GCGTCGGGCG CCGCAGCGAG TTCCTGGCGA TATGCAAGGC GATGGTCGCC GAGGGCGTCA CGCCGGACTT CATCGTGGTG GACGGCGCCG AGGGCGGGAC CGGCGCCGCG CCGCTGGAGT TCCAGGACGG CGTCGGGCAG CCGCTGACCG ACGGGCTCAT GATCGTGCAC AACGCCCTGG TCGGCACCGG GCTGCGGGAC CGGATCCGGA TCGGCGCCAG CGGCAAGGTC GCCACCGGGA TGGACATCGT CAAGCGGGTC GCCATGGGGG CGGACTACAC GAACTCGGCG CGGGCGATGA TGATGGCGGC CGGCTGCATC CAGGCGCGCA TGTGCCACAC CAACCGCTGC CCGGTCGGCG TGGCCACCCA GGACCCGGCC CGCGCCCGCG CGCTGGACGT GGCGGACAAG ACCGAGCGCG TCCGGCAGTT CCAGCAGAAC ACGGTCGCCC AGGCTCAGCA GATCATCGCC GCTATGGGAC TGCGGCATCC CGATGAACTG CGACCGGGCC ATCTGTTGCG CCGCATCGAC CAGAACAGTG TGCGGACCTA CGCCGAGCTG TTCGAATGGC TGGAGCCCGG CGAGCTGCTG AGCGAGGCGC CGCAGGGCTG GGCCGCCGAC TGGCGTGCTG CCAATGCGGA TCGGTTCACC GCCAGCGTGT GA
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Protein sequence | MHVRLSAVSV PVAMVLVTAA SVWATVAVSL WWLFALVPFG ALAVVAIYDV VQRRHSILRN FPLLGHMRYL LEAIRPEMQQ YFIERDYDGR PFDRDTRTVV YEQSKGIHEE TSFGTELDVN QAGYEYVEHA TVPLNPDKEQ PRVRIGGPDC TQPYDMAMLN VSAMSFGSLS ANAIRALNAG AARGGFAHDT GEGGLTPYHL EGGGDLVWEI GSGYFSVRTR DGDFDPEQFR DKVAHPHVKC AELKLSQGAK PGLGGVLPGA KVTAEIARFR EVPEGEKCIS PPAHKVFETP RELVLFMAKM RELADGKPVG FKLCVGRRSE FLAICKAMVA EGVTPDFIVV DGAEGGTGAA PLEFQDGVGQ PLTDGLMIVH NALVGTGLRD RIRIGASGKV ATGMDIVKRV AMGADYTNSA RAMMMAAGCI QARMCHTNRC PVGVATQDPA RARALDVADK TERVRQFQQN TVAQAQQIIA AMGLRHPDEL RPGHLLRRID QNSVRTYAEL FEWLEPGELL SEAPQGWAAD WRAANADRFT ASV
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