Gene Caci_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3403 
Symbol 
ID8334756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3754283 
End bp3755053 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content73% 
IMG OID644956547 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003114150 
Protein GI256392586 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.411638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTC GGGCGTCGGT GCGCCGACGC GTCCACGAGC GGCTCGGCGC GCGCCTGGGA 
CTGACGCTTT TCGTCGCCGT CCCGGCCGCT GCGGCAGCCG GCCTTATTGC GGTAGCAGTG
GAGAGCGCCT GGGATCCCTT CCGCAGGCTT GATCAGCACA CTGCTTCCTA CCTCCACGAC
CACACGATGG GCCATCCAGA CGTCATCAAG ACCCTGCTGC GCGTGTCGGA CATCGGCGGT
CCGACTCCCT CGCGCGTCCT GGTCGGCGTC GTCGCCGTCG CGCTGTGGCT GCGCGGGGCG
CGCCGGCTGG CGGTGTGGGC GGCCTCCACG ATGGTCGCCG GCGCCGTCCT GGACATCGGG
CTGAAGACCC TGGTCGACCG GACCCGGCCG CACCTGCCGA ACCCCTTCGC CCACGCCCCC
GGCGCGTCCT TCCCCTCCGG GCACGCCATG ACCTCGGCGC TGGCCTGCGG GATCGTGCTG
CTGCTGGTGC TGCCGCTGGT GGGCCGGGCG GGCACGATCG CGGCGTGGAC GATCGCGGTG
CTGATCGTGG TCGCGGTCGG CTACAGCCGG GTGGCGCTCG GCGTGCACTG GGTCACCGAC
GTGGTCGGCG CCTGGCTGCT GGCGATCGCG CTGTTGGCGG CGTCGGTCTC GGCGTTCCAG
ACCTGGCGCG TCGAGCACGG GCTGCGGCGG GCGCGGCCGA CGACCGAGGG CGTGGAGCCC
GAGGAGCCCG AGGAAATCCT GTCCGCCGAG CACCGGGGGA GCACCTCATG A
 
Protein sequence
MTARASVRRR VHERLGARLG LTLFVAVPAA AAAGLIAVAV ESAWDPFRRL DQHTASYLHD 
HTMGHPDVIK TLLRVSDIGG PTPSRVLVGV VAVALWLRGA RRLAVWAAST MVAGAVLDIG
LKTLVDRTRP HLPNPFAHAP GASFPSGHAM TSALACGIVL LLVLPLVGRA GTIAAWTIAV
LIVVAVGYSR VALGVHWVTD VVGAWLLAIA LLAASVSAFQ TWRVEHGLRR ARPTTEGVEP
EEPEEILSAE HRGSTS