| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3400 |
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| Symbol | |
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| ID | 8334753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3751765 |
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| End bp | 3752553 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644956544 |
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| Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
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| Protein accession | YP_003114147 |
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| Protein GI | 256392583 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.543445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACGC CTGCCGAATC GGGGGATTAT GCCCGTGAGC GCGCCGCGGC CAGAGCCGCG
TTGGTGCGTT TGCGTCGGAT GGCTCCTGAT GATGCCGAAT ATGAGGGGCT GCGCGAGTTT
GTCATCGGGG AGTACATGTC CTATGCCCGG TATGTAGCCG GCCGGTTCCG CCAGCGCGGG
GAGTCCCAAG CCGATCTGGA GCAGGTCGCC TATCTGGGGC TGGTCAAAGC GGTCGACAAC
TTCGACCCGG ACTATGGTGC GGCTTTTTTG ACGTATGCCA CGCCGATGAT CGCCGGGGAG
GTGCGGCGTC ATTTCCGGGA CACCACCTGG GATGTGCATG TTCCGCGTCG GGTGCAGGAG
AACGCGCTGG CGGTGCGGGC CGCGGAGCGG GAGCTGACGC AGCAGTTGGG GCACGCCCCG
AGTGCGGCGC AGATCGCCGA GCGGCTGGAT CTGTCGGCCG ATGAGGTGGC CGAGGCATAC
GAGGCCAGCG CCGCGCATCA CACCGCTTCG CTGGACGTGC CAGTGGCGAT GGCCGACGGT
GACGGCGCGA GCATGGGTGA GTTGATGGGC GACGACGACC CCGGATATGA CTTGGTGGTG
GATCGGGAGG CGCTCAAGCC GCTGCTGGCC GAATTGAGTC CCCGCGACAA GCGGATCCTG
CTGATGAAGT TCTTCCGCAA CATGTCCCAA GCCCAGATCG GCGCCGAACT CGGCGTCTCC
CAGATGCAGG TCTCCCGCCT GCTCTCGCAG ATCCTCGGAC GGCTGCGCGA CCAAGTCGGC
GCCGGATAA
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| Protein sequence | MNTPAESGDY ARERAAARAA LVRLRRMAPD DAEYEGLREF VIGEYMSYAR YVAGRFRQRG
ESQADLEQVA YLGLVKAVDN FDPDYGAAFL TYATPMIAGE VRRHFRDTTW DVHVPRRVQE
NALAVRAAER ELTQQLGHAP SAAQIAERLD LSADEVAEAY EASAAHHTAS LDVPVAMADG
DGASMGELMG DDDPGYDLVV DREALKPLLA ELSPRDKRIL LMKFFRNMSQ AQIGAELGVS
QMQVSRLLSQ ILGRLRDQVG AG
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