Gene Caci_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3359 
Symbol 
ID8334712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3710057 
End bp3710824 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content73% 
IMG OID644956504 
ProductOxidoreductase FAD-binding domain protein 
Protein accessionYP_003114107 
Protein GI256392543 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.251741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAG CAGCGGTATC AGGGCGACTA GCCGAGCGGC TGCGCTGGCG GGTCGCGACG 
CTGGTCGGGC AGCGCGAGGA GACGCCGACC ACGCGCACGC TGGTGCTGGA CGTGCCGGGC
TGGCCGGGGC ATCTGGCCGG TCAGCACGTG GACGTCCGGC TGACCGCCGA GGACGGCTAC
AGCACGCAGC GCAGCTATTC CATCGCCTCG GCTCCGGACG GCGCGCTGCT GGAGCTGACC
GTGCAGCGGG TCTCCGACGG CGAGGTGTCG CCGTATCTGG CGAGCGACCT GCTCGACGGC
GATCTGCTGG AGTTGCGCGG ACCGGTCGGC GGCTGGTTCG TGTGGGAGCC GGAGCAGACC
GAGCCGGTGC TGCTGGTGGC CGGCGGGTCC GGGATCGTGC CGCTGATGGC GATGGTCCGC
GCGCGCCGGC AGGTGCAGAT GCGGGTCGGG CCGCTGGCGC CGTTCCGGCT GCTGTACTCG
GTGCGCTCCC CGGGCGACCG GATGTATCTC GCCGAGCTTC AGGCGCCGGA TCCCGGGCTG
GATGTGACGT TTCTGTACAC GCGCCAGGCG CCGGAGGGTT TCGCGCGCCG TCCGGGACGG
CTGACCGAGG CGGATCTGGC GGCGGTCGCC TGGCCGGCTT CGGCACGGGC GACCACGTAT
GTGTGCGGGC CGACCGGCTT CGTCGAGCAC GCCGCGGATC TGCTGGTCGG GCTCGGGCAG
GCGCCGGATC TGATCCGCAC CGAACGCTTC GGGCCGACTG GAGGCTGA
 
Protein sequence
MARAAVSGRL AERLRWRVAT LVGQREETPT TRTLVLDVPG WPGHLAGQHV DVRLTAEDGY 
STQRSYSIAS APDGALLELT VQRVSDGEVS PYLASDLLDG DLLELRGPVG GWFVWEPEQT
EPVLLVAGGS GIVPLMAMVR ARRQVQMRVG PLAPFRLLYS VRSPGDRMYL AELQAPDPGL
DVTFLYTRQA PEGFARRPGR LTEADLAAVA WPASARATTY VCGPTGFVEH AADLLVGLGQ
APDLIRTERF GPTGG