Gene Caci_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3339 
Symbol 
ID8334692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3688238 
End bp3689104 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID644956484 
Producthypothetical protein 
Protein accessionYP_003114087 
Protein GI256392523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.63236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGG CCCTCCGCCG CGTCTTCGCC CGCGGCAAGC AAGGCCGCCC GCGCCTGTGG 
ACCGAGCTGG CGCTCATCGT CGTCGGCTAC GTCCTGTACT CCCTGACCCG CGACGCCGTC
CCCGGCCAGC AGGCGACCGC GATGCGGCGC GCCGAGTCGG TCCTGCGGAG CGAGCACCGG
CTGCACATCG ACATCGAGCT GAGCGTCAAC CACGCGCTCG ACAAGATCAC GCCGCTGATC
GTCGGGATGA ACTACTACTA CGCGACGCTG CACTTCGTCA TCACCATCGG CGTCCTGGTC
TGGCTCTACG TACGCCATCC GCAGATCTAC CGCCCGGCGC GCACGGTTTT GTTCCTGGCG
ACGCTGTCGA GCCTGATCGG CTTCTACTTC TTCGCCCTCG CCCCGCCGCG CTTCCTCACC
GACCACGGCT TCATCAGCAC CGTGGTCACG CACCACACCT GGGGTTCGTG GGGCTCCTCG
AACGTGGACT CCATCTCCAA CCAGTACGCC GCCATGCCCA GCGACCACAT CGCCTGGTCC
GGCTGGTGCG GCATCATGCT CTACCGCTAC GCCGGCCGCC GCTGGCTCCG GGTCGCGGGC
CTGCTCTACC CGCTGTTCAC CTTCACGGTC ATCATCGCCA CCGCCAACCA CTTCGTGCTC
GACGCCGTCG GCGGCGCGAT CGCGCTGAGC GCCGCCTTCG CGATCCAGCT CCTGCTCTCC
CGCCTGGGGA GCCGGGGTCG GGGCGCCGAG AGCACGTCCC TACCGACGCC GCGCGCCCAA
CACGACGGTG GCGGGCATCA GGGGACAGTC GGCGAACAAC GCGGCGTCAG TGATGCGGAA
TCCGCAATCG AGCAGCGGGA CGGCTAA
 
Protein sequence
MTAALRRVFA RGKQGRPRLW TELALIVVGY VLYSLTRDAV PGQQATAMRR AESVLRSEHR 
LHIDIELSVN HALDKITPLI VGMNYYYATL HFVITIGVLV WLYVRHPQIY RPARTVLFLA
TLSSLIGFYF FALAPPRFLT DHGFISTVVT HHTWGSWGSS NVDSISNQYA AMPSDHIAWS
GWCGIMLYRY AGRRWLRVAG LLYPLFTFTV IIATANHFVL DAVGGAIALS AAFAIQLLLS
RLGSRGRGAE STSLPTPRAQ HDGGGHQGTV GEQRGVSDAE SAIEQRDG