Gene Caci_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3321 
Symbol 
ID8334674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3664477 
End bp3665226 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID644956466 
ProductABC transporter related 
Protein accessionYP_003114069 
Protein GI256392505 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGTC TCAGCTCCCT GACCGCCGGC TACGACGGCG GCACCGTGCT GCACGGCTTG 
GACCTGGAGA TCCCCGAAGG ATCAGTCCAC GCCGTGGTCG GCCACAACGG CGCCGGCAAG
ACCACGCTGA TCCACACCGT GTCCGGCCTG GTCGCGGCGT CCTCAGGCCG CGTCGGCCTG
GCCGGCGCGG ACGTCACCCG GCAGGCAGCG CACCGCCGAG CCCGCTCCGG CGTAGGCCTC
GTGCCCCAGG GCCGCAGGGT CTTCCCAGGC CTGACCGTCC AGGAACACCT GACCCTCGCC
TTCGGCCGCC GCAGCCGCCG CGACCGAGCC AGCGCGCAAT GGACCCCCGA CAGCGTCAAG
CAACTCCTGC CCCGCCTCGC CGAACGCGCG GGCCACCGAG GCCGCCAACT CTCCGGCGGC
GAACAACAGA TGCTCGCCAT CGCCCGAGCC CTCCTAGGCC AACCCCGCCT CCTCCTCATG
GACGAACCCA CCGAAGGCCT CGCCCCCCTG ATCGTCCAGG ACATAGCAGA CCTCATCAAA
ACCCTCCCCG ACCAAGGCCT CACCATCCTG GTAGCCGCCC CCCGCCCCGC CTTCGCCGCC
GAAGTAGCCG AACGCATCAC CATCCTCGTA GCCGGCCGCG CCGCCGACGA ATTCAGCGCC
AAAGAACTCC GCGACCAACC CGACCTGGCC GCCGAAGCCA TGGGCCACGC CACCGCCGAG
GGCAGCGTCG CGAGCGGCCT GCGGCGGTGA
 
Protein sequence
MLSLSSLTAG YDGGTVLHGL DLEIPEGSVH AVVGHNGAGK TTLIHTVSGL VAASSGRVGL 
AGADVTRQAA HRRARSGVGL VPQGRRVFPG LTVQEHLTLA FGRRSRRDRA SAQWTPDSVK
QLLPRLAERA GHRGRQLSGG EQQMLAIARA LLGQPRLLLM DEPTEGLAPL IVQDIADLIK
TLPDQGLTIL VAAPRPAFAA EVAERITILV AGRAADEFSA KELRDQPDLA AEAMGHATAE
GSVASGLRR