Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3321 |
Symbol | |
ID | 8334674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3664477 |
End bp | 3665226 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644956466 |
Product | ABC transporter related |
Protein accession | YP_003114069 |
Protein GI | 256392505 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGTC TCAGCTCCCT GACCGCCGGC TACGACGGCG GCACCGTGCT GCACGGCTTG GACCTGGAGA TCCCCGAAGG ATCAGTCCAC GCCGTGGTCG GCCACAACGG CGCCGGCAAG ACCACGCTGA TCCACACCGT GTCCGGCCTG GTCGCGGCGT CCTCAGGCCG CGTCGGCCTG GCCGGCGCGG ACGTCACCCG GCAGGCAGCG CACCGCCGAG CCCGCTCCGG CGTAGGCCTC GTGCCCCAGG GCCGCAGGGT CTTCCCAGGC CTGACCGTCC AGGAACACCT GACCCTCGCC TTCGGCCGCC GCAGCCGCCG CGACCGAGCC AGCGCGCAAT GGACCCCCGA CAGCGTCAAG CAACTCCTGC CCCGCCTCGC CGAACGCGCG GGCCACCGAG GCCGCCAACT CTCCGGCGGC GAACAACAGA TGCTCGCCAT CGCCCGAGCC CTCCTAGGCC AACCCCGCCT CCTCCTCATG GACGAACCCA CCGAAGGCCT CGCCCCCCTG ATCGTCCAGG ACATAGCAGA CCTCATCAAA ACCCTCCCCG ACCAAGGCCT CACCATCCTG GTAGCCGCCC CCCGCCCCGC CTTCGCCGCC GAAGTAGCCG AACGCATCAC CATCCTCGTA GCCGGCCGCG CCGCCGACGA ATTCAGCGCC AAAGAACTCC GCGACCAACC CGACCTGGCC GCCGAAGCCA TGGGCCACGC CACCGCCGAG GGCAGCGTCG CGAGCGGCCT GCGGCGGTGA
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Protein sequence | MLSLSSLTAG YDGGTVLHGL DLEIPEGSVH AVVGHNGAGK TTLIHTVSGL VAASSGRVGL AGADVTRQAA HRRARSGVGL VPQGRRVFPG LTVQEHLTLA FGRRSRRDRA SAQWTPDSVK QLLPRLAERA GHRGRQLSGG EQQMLAIARA LLGQPRLLLM DEPTEGLAPL IVQDIADLIK TLPDQGLTIL VAAPRPAFAA EVAERITILV AGRAADEFSA KELRDQPDLA AEAMGHATAE GSVASGLRR
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